6K0R
Ruvbl1-Ruvbl2 with truncated domain II in complex with phosphorylated Cordycepin
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, G, H... (A, B, C, G, H...) | RuvB-like 1,RuvB-like 1 | polymer | 355 | 38840.0 | 6 | UniProt (Q9Y265) Pfam (PF06068) Pfam (PF17856) | Homo sapiens (Human) | 49 kDa TATA box-binding protein-interacting protein,49 kDa TBP-interacting protein,54 kDa erythrocyte cytosolic protein,ECP-54,INO80 complex subunit H,Nuclear matrix protein 238,NMP 238,Pontin 52,TIP49a,TIP60-associated protein 54-alpha,TAP54-alpha,49 kDa TATA box-binding protein-interacting protein,49 kDa TBP-interacting protein,54 kDa erythrocyte cytosolic protein,ECP-54,INO80 complex subunit H,Nuclear matrix protein 238,NMP 238,Pontin 52,TIP49a,TIP60-associated protein 54-alpha,TAP54-alpha |
| 2 | D, E, F, J, K... (D, E, F, J, K...) | RuvB-like 2,RuvB-like 2 | polymer | 366 | 40264.0 | 6 | UniProt (Q9Y230) Pfam (PF06068) Pfam (PF17856) | Homo sapiens (Human) | 48 kDa TATA box-binding protein-interacting protein,48 kDa TBP-interacting protein,51 kDa erythrocyte cytosolic protein,ECP-51,INO80 complex subunit J,Repressing pontin 52,Reptin 52,TIP49b,TIP60-associated protein 54-beta,TAP54-beta,48 kDa TATA box-binding protein-interacting protein,48 kDa TBP-interacting protein,51 kDa erythrocyte cytosolic protein,ECP-51,INO80 complex subunit J,Repressing pontin 52,Reptin 52,TIP49b,TIP60-associated protein 54-beta,TAP54-beta |
| 3 | M (A) | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 1 | Chemie (ADP) | |||
| 4 | N, O, P, S, T... (B, C, D, F, G...) | [(2~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-4-oxidanyl-oxolan-2-yl]methyl phosphono hydrogen phosphate | non-polymer | 411.2 | 8 | Chemie (CUU) | |||
| 5 | Q, Z (D, L) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 6 | R, W (E, J) | 3'-DEOXYADENOSINE-5'-TRIPHOSPHATE | non-polymer | 491.2 | 2 | Chemie (3AT) | |||
| 7 | Y (L) | [(2~{R},3~{S},4~{S})-3,4-bis(oxidanyl)oxolan-2-yl]methyl phosphono hydrogen phosphate | non-polymer | 294.1 | 1 | Chemie (CU0) | |||
| 8 | AA, BA, CA, DA (A, E, F, J) | water | water | 18.0 | 6 | Chemie (HOH) |
Sequence modifications
A, B, C, G, H, I: 2 - 229 (UniProt: Q9Y265)
A, B, C, G, H, I: 234 - 456 (UniProt: Q9Y265)
D, E, F, J, K, L: 1 - 233 (UniProt: Q9Y230)
D, E, F, J, K, L: 238 - 463 (UniProt: Q9Y230)
| PDB | External Database | Details |
|---|---|---|
| Gly -1 | - | expression tag |
| Pro 0 | - | expression tag |
| Ser 1 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly 230 | - | linker |
| Pro 231 | - | linker |
| Pro 232 | - | linker |
| Gly 233 | - | linker |
| PDB | External Database | Details |
|---|---|---|
| Gly -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Ser 0 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly 234 | - | linker |
| Pro 235 | - | linker |
| Pro 236 | - | linker |
| Gly 237 | - | linker |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 474623.8 | |
| Non-Polymers* | Number of molecules | 14 |
| Total formula weight | 5041.9 | |
| All* | Total formula weight | 479665.7 |
