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6K0R

Ruvbl1-Ruvbl2 with truncated domain II in complex with phosphorylated Cordycepin

Functional Information from GO Data
ChainGOidnamespacecontents
A0005524molecular_functionATP binding
A0008094molecular_functionATP-dependent activity, acting on DNA
B0005524molecular_functionATP binding
B0008094molecular_functionATP-dependent activity, acting on DNA
C0005524molecular_functionATP binding
C0008094molecular_functionATP-dependent activity, acting on DNA
D0005524molecular_functionATP binding
D0008094molecular_functionATP-dependent activity, acting on DNA
E0005524molecular_functionATP binding
E0008094molecular_functionATP-dependent activity, acting on DNA
F0005524molecular_functionATP binding
F0008094molecular_functionATP-dependent activity, acting on DNA
G0005524molecular_functionATP binding
G0008094molecular_functionATP-dependent activity, acting on DNA
H0005524molecular_functionATP binding
H0008094molecular_functionATP-dependent activity, acting on DNA
I0005524molecular_functionATP binding
I0008094molecular_functionATP-dependent activity, acting on DNA
J0005524molecular_functionATP binding
J0008094molecular_functionATP-dependent activity, acting on DNA
K0005524molecular_functionATP binding
K0008094molecular_functionATP-dependent activity, acting on DNA
L0005524molecular_functionATP binding
L0008094molecular_functionATP-dependent activity, acting on DNA
Functional Information from PDB Data
site_idAC1
Number of Residues16
Detailsbinding site for residue ADP A 501
ChainResidue
ASER17
ALYS76
ATHR77
AALA78
ATYR366
AILE374
ALEU403
AARG404
AHIS18
AHIS20
AGLY38
ALEU39
AVAL40
AGLY73
ATHR74
AGLY75

site_idAC2
Number of Residues15
Detailsbinding site for residue CUU B 501
ChainResidue
BSER17
BHIS18
BHIS20
BGLY38
BLEU39
BVAL40
BGLY73
BTHR74
BGLY75
BLYS76
BTHR77
BALA78
BTYR366
BILE374
BLEU403

site_idAC3
Number of Residues16
Detailsbinding site for residue CUU C 501
ChainResidue
CSER17
CHIS18
CHIS20
CGLY38
CLEU39
CVAL40
CPRO72
CGLY73
CTHR74
CGLY75
CLYS76
CTHR77
CALA78
CTYR366
CILE374
CLEU403

site_idAC4
Number of Residues14
Detailsbinding site for residue CUU D 501
ChainResidue
DHIS27
DMET46
DVAL47
DGLY80
DTHR81
DGLY82
DLYS83
DTHR84
DALA85
DTYR362
DILE370
DLEU399
DILE403
DMG502

site_idAC5
Number of Residues1
Detailsbinding site for residue MG D 502
ChainResidue
DCUU501

site_idAC6
Number of Residues17
Detailsbinding site for residue 3AT E 501
ChainResidue
AASP356
EALA24
EHIS27
EGLY45
EMET46
EVAL47
EGLY80
ETHR81
EGLY82
ELYS83
ETHR84
EALA85
EASP299
ETYR362
EILE370
ELEU399
EILE403

site_idAC7
Number of Residues12
Detailsbinding site for residue CUU F 501
ChainResidue
FALA24
FHIS25
FHIS27
FGLY45
FMET46
FVAL47
FGLY80
FTHR81
FGLY82
FLYS83
FTHR84
FTYR362

site_idAC8
Number of Residues15
Detailsbinding site for residue CUU G 501
ChainResidue
GGLY75
GLYS76
GTHR77
GALA78
GTYR366
GILE374
GLEU403
GSER17
GHIS18
GHIS20
GGLY38
GLEU39
GVAL40
GGLY73
GTHR74

site_idAC9
Number of Residues14
Detailsbinding site for residue CUU H 501
ChainResidue
HSER17
HHIS18
HHIS20
HGLY38
HLEU39
HVAL40
HGLY73
HTHR74
HGLY75
HLYS76
HTHR77
HASP302
HTYR366
HILE374

site_idAD1
Number of Residues16
Detailsbinding site for residue CUU I 501
ChainResidue
ISER17
IHIS18
IHIS20
IGLY38
ILEU39
IVAL40
IPRO72
IGLY73
ITHR74
IGLY75
ILYS76
ITHR77
IALA78
ITYR366
IILE374
ILEU403

site_idAD2
Number of Residues15
Detailsbinding site for residue 3AT J 501
ChainResidue
JHIS25
JHIS27
JGLY45
JMET46
JVAL47
JGLN49
JGLY80
JTHR81
JGLY82
JLYS83
JTHR84
JASP299
JTYR362
JLEU399
JHOH601

site_idAD3
Number of Residues14
Detailsbinding site for residue CUU K 501
ChainResidue
KALA24
KHIS25
KHIS27
KGLY45
KMET46
KVAL47
KGLY80
KTHR81
KGLY82
KLYS83
KTHR84
KTYR362
KILE370
KLEU399

site_idAD4
Number of Residues10
Detailsbinding site for residue CU0 L 501
ChainResidue
LHIS25
LGLY80
LTHR81
LGLY82
LLYS83
LTHR84
LALA85
LLEU399
LILE403
LMG502

site_idAD5
Number of Residues1
Detailsbinding site for residue MG L 502
ChainResidue
LCU0501

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues42
DetailsBinding site: {"evidences":[{"evidenceCode":"ECO:0000250"}]}
ChainResidueDetails

site_idSWS_FT_FI2
Number of Residues24
DetailsCross-link: {"description":"Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in SUMO2)","evidences":[{"source":"PubMed","id":"28112733","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

site_idSWS_FT_FI3
Number of Residues42
DetailsBinding site: {}
ChainResidueDetails

site_idSWS_FT_FI4
Number of Residues6
DetailsModified residue: {"description":"Phosphoserine","evidences":[{"source":"PubMed","id":"23186163","evidenceCode":"ECO:0007744"}]}
ChainResidueDetails

239149

PDB entries from 2025-07-23

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