6IY6
Crystal structure of human cytosolic aspartyl-tRNA synthetase (DRS) in complex with glutathion-S transferase (GST) domains from Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 (AIMP2) and glutamyl-prolyl-tRNA synthetase (EPRS)
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, G, H | Aspartate--tRNA ligase, cytoplasmic | polymer | 502 | 57310.1 | 4 | UniProt (P14868) Pfam (PF01336) Pfam (PF00152) In PDB | Homo sapiens (Human) | Aspartyl-tRNA synthetase,AspRS,Cell proliferation-inducing gene 40 protein |
2 | C, D, I, J | Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 | polymer | 215 | 24165.0 | 4 | UniProt (Q13155) Pfam (PF18569) Pfam (PF00043) In PDB | Homo sapiens (Human) | Multisynthase complex auxiliary component p38,Protein JTV-1 |
3 | E, F, K, L | Bifunctional glutamate/proline--tRNA ligase | polymer | 165 | 18434.8 | 4 | UniProt (P07814) Pfam (PF21972) In PDB | Homo sapiens (Human) | Bifunctional aminoacyl-tRNA synthetase,Cell proliferation-inducing gene 32 protein,Glutamatyl-prolyl-tRNA synthetase |
4 | H, A | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
5 | G, H, A, B | PHOSPHATE ION | non-polymer | 95.0 | 17 | Chemie (PO4) | |||
6 | water | water | 18.0 | 12 | Chemie (HOH) |
Sequence modifications
A, B, G, H: 21 - 501 (UniProt: P14868)
C, D, I, J: 115 - 320 (UniProt: Q13155)
E, F, K, L: 1 - 157 (UniProt: P07814)
PDB | External Database | Details |
---|---|---|
Met 0 | - | initiating methionine |
Gly 1 | - | expression tag |
Ser 2 | - | expression tag |
Ser 3 | - | expression tag |
His 4 | - | expression tag |
His 5 | - | expression tag |
His 6 | - | expression tag |
His 7 | - | expression tag |
His 8 | - | expression tag |
His 9 | - | expression tag |
Ser 10 | - | expression tag |
Ser 11 | - | expression tag |
Gly 12 | - | expression tag |
Leu 13 | - | expression tag |
Val 14 | - | expression tag |
Pro 15 | - | expression tag |
Arg 16 | - | expression tag |
Gly 17 | - | expression tag |
Ser 18 | - | expression tag |
His 19 | - | expression tag |
Met 20 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Met 114 | - | initiating methionine |
Leu 321 | - | expression tag |
Glu 322 | - | expression tag |
His 323 | - | expression tag |
His 324 | - | expression tag |
His 325 | - | expression tag |
His 326 | - | expression tag |
His 327 | - | expression tag |
His 328 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Leu 158 | - | expression tag |
Glu 159 | - | expression tag |
His 160 | - | expression tag |
His 161 | - | expression tag |
His 162 | - | expression tag |
His 163 | - | expression tag |
His 164 | - | expression tag |
His 165 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 12 |
Total formula weight | 399639.8 | |
Non-Polymers* | Number of molecules | 19 |
Total formula weight | 1745.3 | |
All* | Total formula weight | 401385.1 |