6HQA

Molecular structure of promoter-bound yeast TFIID

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A (A)	Taf2	polymer	1756	199179.1	1	UniProt (by SIFTS) (C4R289)	Komagataella phaffii GS115
2	B, C (B, C)	Subunit (90 kDa) of TFIID and SAGA complexes	polymer	722	80933.0	2	UniProt (C4R4L4) Pfam (PF08513) Pfam (PF04494) Pfam (PF00400)	Komagataella phaffii (strain GS115 / ATCC 20864) (Yeast)
3	D, E (D, E)	Subunit (60 kDa) of TFIID and SAGA complexes	polymer	485	54888.4	2	UniProt (C4QW33) Pfam (PF07571) Pfam (PF02969)	Komagataella phaffii (strain GS115 / ATCC 20864) (Yeast)
4	F (F)	Subunit (17 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiation	polymer	153	17303.6	1	UniProt (C4QZS5) Pfam (PF02291)	Komagataella phaffii (strain GS115 / ATCC 20864) (Yeast)
5	G (G)	Taf8	polymer	75	6400.9	1		Komagataella phaffii GS115
6	H (I)	Histone-fold	polymer	64	5464.7	1		Komagataella phaffii GS115
7	I (H)	Histone-fold	polymer	68	5805.1	1		Komagataella phaffii GS115
8	J (K)	Subunit (61/68 kDa) of TFIID and SAGA complexes	polymer	609	66690.1	1	UniProt (C4R150) Pfam (PF03847)	Komagataella phaffii (strain GS115 / ATCC 20864) (Yeast)
9	K (J)	TFIID subunit (48 kDa)	polymer	553	61942.9	1	UniProt (C4R420) Pfam (PF05236)	Komagataella phaffii (strain GS115 / ATCC 20864) (Yeast)

Sequence modifications

J: 1 - 411 (UniProt: C4R420)

PDB	External Database	Details
Met -141	-	initiating methionine
Ser -140	-	expression tag
Arg -139	-	expression tag
Lys -138	-	expression tag
Pro -137	-	expression tag
Glu -136	-	expression tag
Arg -135	-	expression tag
Arg -134	-	expression tag
Arg -133	-	expression tag
Gln -132	-	expression tag
Pro -131	-	expression tag
Arg -130	-	expression tag
Leu -129	-	expression tag
Phe -128	-	expression tag
Ser -127	-	expression tag
Asn -126	-	expression tag
Asp -125	-	expression tag
Met -124	-	expression tag
Arg -123	-	expression tag
Thr -122	-	expression tag
Leu -121	-	expression tag
Leu -120	-	expression tag
Phe -119	-	expression tag
Ala -118	-	expression tag
Tyr -117	-	expression tag
Gly -116	-	expression tag
Asp -115	-	expression tag
Val -114	-	expression tag
Gln -113	-	expression tag
Gln -112	-	expression tag
Pro -111	-	expression tag
Gln -110	-	expression tag
Leu -109	-	expression tag
Glu -108	-	expression tag
Thr -107	-	expression tag
Ile -106	-	expression tag
Gln -105	-	expression tag
Ala -104	-	expression tag
Leu -103	-	expression tag
Glu -102	-	expression tag
Asp -101	-	expression tag
Val -100	-	expression tag
Met -99	-	expression tag
Ile -98	-	expression tag
Val -97	-	expression tag
Phe -96	-	expression tag
Met -95	-	expression tag
Thr -94	-	expression tag
Asp -93	-	expression tag
Leu -92	-	expression tag
Cys -91	-	expression tag
His -90	-	expression tag
Glu -89	-	expression tag
Ala -88	-	expression tag
Met -87	-	expression tag
Thr -86	-	expression tag
Tyr -85	-	expression tag
Ala -84	-	expression tag
Thr -83	-	expression tag
Tyr -82	-	expression tag
Gln -81	-	expression tag
Gly -80	-	expression tag
Arg -79	-	expression tag
Lys -78	-	expression tag
His -77	-	expression tag
Lys -76	-	expression tag
Leu -75	-	expression tag
Lys -74	-	expression tag
Met -73	-	expression tag
Glu -72	-	expression tag
Asp -71	-	expression tag
Phe -70	-	expression tag
Lys -69	-	expression tag
Phe -68	-	expression tag
Ala -67	-	expression tag
Leu -66	-	expression tag
Arg -65	-	expression tag
Lys -64	-	expression tag
Asp -63	-	expression tag
Arg -62	-	expression tag
Leu -61	-	expression tag
Lys -60	-	expression tag
Leu -59	-	expression tag
Gly -58	-	expression tag
Arg -57	-	expression tag
Val -56	-	expression tag
Glu -55	-	expression tag
Glu -54	-	expression tag
Leu -53	-	expression tag
Met -52	-	expression tag
Asn -51	-	expression tag
Lys -50	-	expression tag
Gln -49	-	expression tag
Lys -48	-	expression tag
Glu -47	-	expression tag
Ile -46	-	expression tag
Gln -45	-	expression tag
Glu -44	-	expression tag
Ala -43	-	expression tag
Arg -42	-	expression tag
Lys -41	-	expression tag
Leu -40	-	expression tag
Phe -39	-	expression tag
Asp -38	-	expression tag
Ser -37	-	expression tag
Asn -36	-	expression tag
Glu -35	-	expression tag
Lys -34	-	expression tag
Glu -33	-	expression tag
Thr -32	-	expression tag
Lys -31	-	expression tag
Asp -30	-	expression tag
Asp -29	-	expression tag
Asp -28	-	expression tag
Ile -27	-	expression tag
Glu -26	-	expression tag
Lys -25	-	expression tag
Lys -24	-	expression tag
Arg -23	-	expression tag
Arg -22	-	expression tag
Lys -21	-	expression tag
Glu -20	-	expression tag
Ala -19	-	expression tag
Lys -18	-	expression tag
Arg -17	-	expression tag
Ala -16	-	expression tag
Ile -15	-	expression tag
Lys -14	-	expression tag
Glu -13	-	expression tag
Ala -12	-	expression tag
Lys -11	-	expression tag
Lys -10	-	expression tag
Leu -9	-	expression tag
Lys -8	-	expression tag
Leu -7	-	expression tag
Ser -6	-	expression tag
Lys -5	-	expression tag
Gly -4	-	expression tag
Asp -3	-	expression tag
Thr -2	-	expression tag
Ala -1	-	expression tag
Phe 0	-	expression tag

Contents of the asymmetric unit

Polymers	Number of chains	11
	Total formula weight	634429.3
All*	Total formula weight	634429.3

*Water molecules are not included.