6HQA
Molecular structure of promoter-bound yeast TFIID
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A | Taf2 | polymer | 1756 | 199179.1 | 1 | UniProt (by SIFTS) (C4R289) In PDB | Komagataella phaffii GS115 | |
2 | B, C | Subunit (90 kDa) of TFIID and SAGA complexes | polymer | 722 | 80933.0 | 2 | UniProt (C4R4L4) Pfam (PF08513) Pfam (PF04494) Pfam (PF00400) In PDB | Komagataella phaffii (strain GS115 / ATCC 20864) (Yeast) | |
3 | D, E | Subunit (60 kDa) of TFIID and SAGA complexes | polymer | 485 | 54888.4 | 2 | UniProt (C4QW33) Pfam (PF07571) Pfam (PF02969) In PDB | Komagataella phaffii (strain GS115 / ATCC 20864) (Yeast) | |
4 | F | Subunit (17 kDa) of TFIID and SAGA complexes, involved in RNA polymerase II transcription initiation | polymer | 153 | 17303.6 | 1 | UniProt (C4QZS5) Pfam (PF02291) In PDB | Komagataella phaffii (strain GS115 / ATCC 20864) (Yeast) | |
5 | G | Taf8 | polymer | 75 | 6400.9 | 1 | Komagataella phaffii GS115 | ||
6 | I | Histone-fold | polymer | 64 | 5464.7 | 1 | Komagataella phaffii GS115 | ||
7 | H | Histone-fold | polymer | 68 | 5805.1 | 1 | Komagataella phaffii GS115 | ||
8 | K | Subunit (61/68 kDa) of TFIID and SAGA complexes | polymer | 609 | 66690.1 | 1 | UniProt (C4R150) Pfam (PF03847) In PDB | Komagataella phaffii (strain GS115 / ATCC 20864) (Yeast) | |
9 | J | TFIID subunit (48 kDa) | polymer | 553 | 61942.9 | 1 | UniProt (C4R420) Pfam (PF05236) In PDB | Komagataella phaffii (strain GS115 / ATCC 20864) (Yeast) |
Sequence modifications
J: 1 - 411 (UniProt: C4R420)
PDB | External Database | Details |
---|---|---|
Met -141 | - | initiating methionine |
Ser -140 | - | expression tag |
Arg -139 | - | expression tag |
Lys -138 | - | expression tag |
Pro -137 | - | expression tag |
Glu -136 | - | expression tag |
Arg -135 | - | expression tag |
Arg -134 | - | expression tag |
Arg -133 | - | expression tag |
Gln -132 | - | expression tag |
Pro -131 | - | expression tag |
Arg -130 | - | expression tag |
Leu -129 | - | expression tag |
Phe -128 | - | expression tag |
Ser -127 | - | expression tag |
Asn -126 | - | expression tag |
Asp -125 | - | expression tag |
Met -124 | - | expression tag |
Arg -123 | - | expression tag |
Thr -122 | - | expression tag |
Leu -121 | - | expression tag |
Leu -120 | - | expression tag |
Phe -119 | - | expression tag |
Ala -118 | - | expression tag |
Tyr -117 | - | expression tag |
Gly -116 | - | expression tag |
Asp -115 | - | expression tag |
Val -114 | - | expression tag |
Gln -113 | - | expression tag |
Gln -112 | - | expression tag |
Pro -111 | - | expression tag |
Gln -110 | - | expression tag |
Leu -109 | - | expression tag |
Glu -108 | - | expression tag |
Thr -107 | - | expression tag |
Ile -106 | - | expression tag |
Gln -105 | - | expression tag |
Ala -104 | - | expression tag |
Leu -103 | - | expression tag |
Glu -102 | - | expression tag |
Asp -101 | - | expression tag |
Val -100 | - | expression tag |
Met -99 | - | expression tag |
Ile -98 | - | expression tag |
Val -97 | - | expression tag |
Phe -96 | - | expression tag |
Met -95 | - | expression tag |
Thr -94 | - | expression tag |
Asp -93 | - | expression tag |
Leu -92 | - | expression tag |
Cys -91 | - | expression tag |
His -90 | - | expression tag |
Glu -89 | - | expression tag |
Ala -88 | - | expression tag |
Met -87 | - | expression tag |
Thr -86 | - | expression tag |
Tyr -85 | - | expression tag |
Ala -84 | - | expression tag |
Thr -83 | - | expression tag |
Tyr -82 | - | expression tag |
Gln -81 | - | expression tag |
Gly -80 | - | expression tag |
Arg -79 | - | expression tag |
Lys -78 | - | expression tag |
His -77 | - | expression tag |
Lys -76 | - | expression tag |
Leu -75 | - | expression tag |
Lys -74 | - | expression tag |
Met -73 | - | expression tag |
Glu -72 | - | expression tag |
Asp -71 | - | expression tag |
Phe -70 | - | expression tag |
Lys -69 | - | expression tag |
Phe -68 | - | expression tag |
Ala -67 | - | expression tag |
Leu -66 | - | expression tag |
Arg -65 | - | expression tag |
Lys -64 | - | expression tag |
Asp -63 | - | expression tag |
Arg -62 | - | expression tag |
Leu -61 | - | expression tag |
Lys -60 | - | expression tag |
Leu -59 | - | expression tag |
Gly -58 | - | expression tag |
Arg -57 | - | expression tag |
Val -56 | - | expression tag |
Glu -55 | - | expression tag |
Glu -54 | - | expression tag |
Leu -53 | - | expression tag |
Met -52 | - | expression tag |
Asn -51 | - | expression tag |
Lys -50 | - | expression tag |
Gln -49 | - | expression tag |
Lys -48 | - | expression tag |
Glu -47 | - | expression tag |
Ile -46 | - | expression tag |
Gln -45 | - | expression tag |
Glu -44 | - | expression tag |
Ala -43 | - | expression tag |
Arg -42 | - | expression tag |
Lys -41 | - | expression tag |
Leu -40 | - | expression tag |
Phe -39 | - | expression tag |
Asp -38 | - | expression tag |
Ser -37 | - | expression tag |
Asn -36 | - | expression tag |
Glu -35 | - | expression tag |
Lys -34 | - | expression tag |
Glu -33 | - | expression tag |
Thr -32 | - | expression tag |
Lys -31 | - | expression tag |
Asp -30 | - | expression tag |
Asp -29 | - | expression tag |
Asp -28 | - | expression tag |
Ile -27 | - | expression tag |
Glu -26 | - | expression tag |
Lys -25 | - | expression tag |
Lys -24 | - | expression tag |
Arg -23 | - | expression tag |
Arg -22 | - | expression tag |
Lys -21 | - | expression tag |
Glu -20 | - | expression tag |
Ala -19 | - | expression tag |
Lys -18 | - | expression tag |
Arg -17 | - | expression tag |
Ala -16 | - | expression tag |
Ile -15 | - | expression tag |
Lys -14 | - | expression tag |
Glu -13 | - | expression tag |
Ala -12 | - | expression tag |
Lys -11 | - | expression tag |
Lys -10 | - | expression tag |
Leu -9 | - | expression tag |
Lys -8 | - | expression tag |
Leu -7 | - | expression tag |
Ser -6 | - | expression tag |
Lys -5 | - | expression tag |
Gly -4 | - | expression tag |
Asp -3 | - | expression tag |
Thr -2 | - | expression tag |
Ala -1 | - | expression tag |
Phe 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 11 |
Total formula weight | 634429.3 | |
All* | Total formula weight | 634429.3 |