6HJX
X-ray structure of a pentameric ligand gated ion channel from Erwinia chrysanthemi (ELIC) 7'C pore mutant (L238C) in complex with nanobody 72
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Cys-loop ligand-gated ion channel | polymer | 306 | 35244.1 | 1 | UniProt (P0C7B7) | Dickeya chrysanthemi (Pectobacterium chrysanthemi) | ELIC |
| 2 | B (B) | Cys-loop ligand-gated ion channel | polymer | 309 | 35555.4 | 1 | UniProt (P0C7B7) | Dickeya chrysanthemi (Pectobacterium chrysanthemi) | ELIC |
| 3 | C (C) | Cys-loop ligand-gated ion channel | polymer | 312 | 35880.8 | 1 | UniProt (P0C7B7) | Dickeya chrysanthemi (Pectobacterium chrysanthemi) | ELIC |
| 4 | D (D) | Cys-loop ligand-gated ion channel | polymer | 310 | 35726.7 | 1 | UniProt (P0C7B7) | Dickeya chrysanthemi (Pectobacterium chrysanthemi) | ELIC |
| 5 | E (E) | Cys-loop ligand-gated ion channel | polymer | 307 | 35359.1 | 1 | UniProt (P0C7B7) | Dickeya chrysanthemi (Pectobacterium chrysanthemi) | ELIC |
| 6 | F, G, H, I, J (F, G, H, I, J) | nanobody 72 | polymer | 124 | 13368.0 | 5 | Lama glama | ||
| 7 | K, O, T, V (A, B, D, E) | HEXAETHYLENE GLYCOL | non-polymer | 282.3 | 4 | Chemie (P6G) | |||
| 8 | L (A) | PHOSPHATIDYLETHANOLAMINE | non-polymer | 734.0 | 1 | Chemie (PTY) | |||
| 9 | M, N, P, S, U (A, B, C, D, E) | DODECYL-BETA-D-MALTOSIDE | non-polymer | 510.6 | 5 | Chemie (LMT) | |||
| 10 | Q (C) | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID | non-polymer | 195.2 | 1 | Chemie (MES) | |||
| 11 | R (C) | SODIUM ION | non-polymer | 23.0 | 1 | Chemie (NA) | |||
| 12 | AA, BA, CA, DA, EA... (E, F, G, H, I...) | water | water | 18.0 | 308 | Chemie (HOH) |
Sequence modifications
A: 9 - 314 (UniProt: P0C7B7)
B: 8 - 314 (UniProt: P0C7B7)
C: 8 - 317 (UniProt: P0C7B7)
D: 9 - 318 (UniProt: P0C7B7)
E: 8 - 314 (UniProt: P0C7B7)
| PDB | External Database | Details |
|---|---|---|
| Gly 164 | - | insertion |
| Cys 238 | Leu 237 | engineered mutation |
| Asn 289 | Met 288 | conflict |
| Ser 300 | Cys 299 | engineered mutation |
| Ser 313 | Cys 312 | engineered mutation |
| PDB | External Database | Details |
|---|---|---|
| Pro 6 | - | expression tag |
| Val 7 | - | expression tag |
| Gly 164 | - | insertion |
| Cys 238 | Leu 237 | engineered mutation |
| Asn 289 | Met 288 | conflict |
| Ser 300 | Cys 299 | engineered mutation |
| Ser 313 | Cys 312 | engineered mutation |
| PDB | External Database | Details |
|---|---|---|
| Pro 6 | - | expression tag |
| Val 7 | - | expression tag |
| Gly 164 | - | insertion |
| Cys 238 | Leu 237 | engineered mutation |
| Asn 289 | Met 288 | conflict |
| Ser 300 | Cys 299 | engineered mutation |
| Ser 313 | Cys 312 | engineered mutation |
| PDB | External Database | Details |
|---|---|---|
| Gly 164 | - | insertion |
| Cys 238 | Leu 237 | engineered mutation |
| Asn 289 | Met 288 | conflict |
| Ser 300 | Cys 299 | engineered mutation |
| Ser 313 | Cys 312 | engineered mutation |
| PDB | External Database | Details |
|---|---|---|
| Gly 164 | - | insertion |
| Cys 238 | Leu 237 | engineered mutation |
| Asn 289 | Met 288 | conflict |
| Ser 300 | Cys 299 | engineered mutation |
| Ser 313 | Cys 312 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 10 |
| Total formula weight | 244605.9 | |
| Non-Polymers* | Number of molecules | 12 |
| Total formula weight | 4634.7 | |
| All* | Total formula weight | 249240.6 |






