Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6H8P

JMJD2A/ KDM4A COMPLEXED WITH NI(II), NOG AND Histone H1.4(18-32)K26me3 peptide (15-mer)

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Lysine-specific demethylase 4Apolymer38144326.32UniProt (O75164)
Pfam (PF02375)
Pfam (PF02373)
Homo sapiens (Human)JmjC domain-containing histone demethylation protein 3A,Jumonji domain-containing protein 2A
2C, D
(C, D)
Histone H1.4polymer151589.02UniProt (P10412)Homo sapiensHistone H1b,Histone H1s-4
3E, L
(A, B)
NICKEL (II) IONnon-polymer58.72Chemie (NI)
4F, M
(A, B)
ZINC IONnon-polymer65.42Chemie (ZN)
5G, N
(A, B)
CHLORIDE IONnon-polymer35.52Chemie (CL)
6H, O
(A, B)
N-OXALYLGLYCINEnon-polymer147.12Chemie (OGA)
7I, J, K, P
(A, B)
GLYCEROLnon-polymer92.14Chemie (GOL)
8Q, R, S, T
(A, B, C, D)
waterwater18.0454Chemie (HOH)
Sequence modifications
A, B: 1 - 359 (UniProt: O75164)
PDBExternal DatabaseDetails
Met -21-initiating methionine
His -20-expression tag
His -19-expression tag
His -18-expression tag
His -17-expression tag
His -16-expression tag
His -15-expression tag
Ser -14-expression tag
Ser -13-expression tag
Gly -12-expression tag
Val -11-expression tag
Asp -10-expression tag
Leu -9-expression tag
Gly -8-expression tag
Thr -7-expression tag
Glu -6-expression tag
Asn -5-expression tag
Leu -4-expression tag
Tyr -3-expression tag
Phe -2-expression tag
Gln -1-expression tag
Ser 0-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight91830.5
Non-Polymers*Number of molecules12
Total formula weight981.7
All*Total formula weight92812.2
*Water molecules are not included.

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon