6FXT
Crystal Structure of full-length Human Lysyl Hydroxylase LH3 - Cocrystal with Fe2+, Mn2+, UDP-Glc
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 | polymer | 718 | 82784.4 | 1 | UniProt (O60568) Pfam (PF03171) In PDB | Homo sapiens (Human) | Lysyl hydroxylase 3,LH3 |
| 2 | B | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
| 3 | A | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
| 4 | A | 2-OXOGLUTARIC ACID | non-polymer | 146.1 | 1 | Chemie (AKG) | |||
| 5 | A | URIDINE-5'-DIPHOSPHATE | non-polymer | 404.2 | 1 | Chemie (UDP) | |||
| 6 | A | FE (II) ION | non-polymer | 55.8 | 2 | Chemie (FE2) | |||
| 7 | A | MANGANESE (II) ION | non-polymer | 54.9 | 1 | Chemie (MN) | |||
| 8 | A | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 1 | Chemie (NAG) | |||
| 9 | water | water | 18.0 | 150 | Chemie (HOH) |
Sequence modifications
A: 25 - 738 (UniProt: O60568)
| PDB | External Database | Details |
|---|---|---|
| Ser 24 | - | expression tag |
| Ala 739 | - | expression tag |
| Ala 740 | - | expression tag |
| Ala 741 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 82784.4 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 424.4 | |
| Non-Polymers* | Number of molecules | 8 |
| Total formula weight | 1122.3 | |
| All* | Total formula weight | 84331.1 |
