6F5R
Crystal Structure of KDM4D with GF028 ligand
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Lysine-specific demethylase 4D | polymer | 327 | 37750.8 | 1 | UniProt (Q6B0I6) Pfam (PF02375) Pfam (PF02373) | Homo sapiens (Human) | JmjC domain-containing histone demethylation protein 3D,Jumonji domain-containing protein 2D |
| 2 | B (A) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 3 | C (A) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
| 4 | D, E, F, G, H... (A) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 9 | Chemie (EDO) | |||
| 5 | M (A) | NICKEL (II) ION | non-polymer | 58.7 | 1 | Chemie (NI) | |||
| 6 | N, O (A) | SULFATE ION | non-polymer | 96.1 | 2 | Chemie (SO4) | |||
| 7 | P (A) | 2-(3-oxidanylpropylamino)pyridine-4-carboxylic acid | non-polymer | 196.2 | 1 | Chemie (CQZ) | |||
| 8 | Q (A) | water | water | 18.0 | 326 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 1 |
| Total formula weight | 37750.8 | |
| Non-Polymers* | Number of molecules | 15 |
| Total formula weight | 1106.5 | |
| All* | Total formula weight | 38857.3 |
