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6DP3

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 10 mM Mg2+ and 75 mM K+ for 40 s at 21 C

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1ARibonuclease Hpolymer14216330.51UniProt (Q9KEI9)
In PDB
Bacillus haloduransRNase H
2B5'-R(*AP*CP*AP*U)-3' portion of cleaved RNA 5'-R(*AP*CP*AP*UP*CP*G)-3'polymer41224.81synthetic construct
3b5'-R(P*CP*G)-3' portion of cleaved RNA 5'-R(*AP*CP*AP*UP*CP*G)-3'polymer2605.41synthetic construct
4CDNA (5'-D(*CP*GP*AP*TP*GP*T)-3')polymer61824.21synthetic construct
5AMAGNESIUM IONnon-polymer24.32Chemie (MG)
6A, CPOTASSIUM IONnon-polymer39.13Chemie (K)
7AIODIDE IONnon-polymer126.93Chemie (IOD)
8C, AGLYCEROLnon-polymer92.19Chemie (GOL)
9A, C1,2-ETHANEDIOLnon-polymer62.16Chemie (EDO)
10waterwater18.0110Chemie (HOH)
Sequence modifications
A: 59 - 196 (UniProt: Q9KEI9)
PDBExternal DatabaseDetails
Gly 55-expression tag
Ser 56-expression tag
His 57-expression tag
Met 58-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight19984.9
Non-Polymers*Number of molecules23
Total formula weight1747.9
All*Total formula weight21732.8
*Water molecules are not included.

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PDB entries from 2024-06-19

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