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6DP3

Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 10 mM Mg2+ and 75 mM K+ for 40 s at 21 C

Functional Information from GO Data
ChainGOidnamespacecontents
A0003676molecular_functionnucleic acid binding
A0004523molecular_functionRNA-DNA hybrid ribonuclease activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
Detailsbinding site for residue MG A 201
ChainResidue
AASP71
AASP192
AHOH302
AHOH307
AHOH317
bC5

site_idAC2
Number of Residues5
Detailsbinding site for residue MG A 202
ChainResidue
BU4
bC5
AASP71
AGLU109
AASP132

site_idAC3
Number of Residues8
Detailsbinding site for residue K A 203
ChainResidue
AASP192
ATYR193
AGLY194
AARG195
ALYS196
AHOH302
AHOH325
bG6

site_idAC4
Number of Residues2
Detailsbinding site for residue K A 204
ChainResidue
AGLU188
bC5

site_idAC5
Number of Residues6
Detailsbinding site for residue GOL A 208
ChainResidue
AGLY76
AASN77
APRO78
AHOH305
CDG2
CDA3

site_idAC6
Number of Residues8
Detailsbinding site for residue GOL A 209
ChainResidue
ATYR83
ALEU111
AVAL114
AHIS115
AARG118
AALA165
AHOH301
AHOH319

site_idAC7
Number of Residues8
Detailsbinding site for residue GOL A 210
ChainResidue
AHIS115
ATYR119
AGLU122
AARG123
AGLU167
AASN170
AHOH334
AHOH358

site_idAC8
Number of Residues7
Detailsbinding site for residue GOL A 211
ChainResidue
AARG97
ALEU169
AASN170
AHIS172
ATHR173
AGOL219
AHOH328

site_idAC9
Number of Residues3
Detailsbinding site for residue EDO A 212
ChainResidue
AGLU66
ASER125
ALYS127

site_idAD1
Number of Residues3
Detailsbinding site for residue EDO A 214
ChainResidue
ALYS121
AGLU122
AASN124

site_idAD2
Number of Residues5
Detailsbinding site for residue EDO A 215
ChainResidue
ATRP65
ALYS89
AARG151
AASN152
AALA156

site_idAD3
Number of Residues2
Detailsbinding site for residue EDO A 216
ChainResidue
AASN152
AGLU154

site_idAD4
Number of Residues5
Detailsbinding site for residue GOL A 217
ChainResidue
AGLU122
AARG123
AASP163
AGLU166
AHOH304

site_idAD5
Number of Residues6
Detailsbinding site for residue GOL A 219
ChainResidue
ALYS143
AHIS172
ATHR173
ATYR174
AGOL211
AHOH364

site_idAD6
Number of Residues4
Detailsbinding site for residue GOL A 220
ChainResidue
ALYS141
AILE178
ALEU179
ALYS180

site_idAD7
Number of Residues3
Detailsbinding site for residue K C 101
ChainResidue
CDG5
CEDO102
CHOH207

site_idAD8
Number of Residues8
Detailsbinding site for residues EDO A 213 and GOL A 218
ChainResidue
AGLU62
AILE63
ATRP65
ASER147
ALEU149
AVAL150
AARG151
AHOH303

site_idAD9
Number of Residues6
Detailsbinding site for residues EDO C 102 and GOL C 103
ChainResidue
ATHR148
ALYS196
CDT4
CDG5
CK101
CHOH207

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues4
DetailsBINDING: BINDING => ECO:0000269|PubMed:15989951
ChainResidueDetails
AASP71
AGLU109
AASP132
AASP192

221371

PDB entries from 2024-06-19

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