6DLD
Crystal structure of IgLON5/NEGR1 heterodimer
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, C (A, C) | IgLON family member 5 | polymer | 303 | 33543.4 | 2 | UniProt (A6NGN9) Pfam (PF07686) Pfam (PF13927) | Homo sapiens (Human) | |
| 2 | B, D (B, D) | Neuronal growth regulator 1 | polymer | 304 | 33396.3 | 2 | UniProt (Q7Z3B1) Pfam (PF07679) Pfam (PF13927) | Homo sapiens (Human) | IgLON family member 4 |
| 3 | E (E) | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G81315DD) | |||
| 4 | F, G, H, I, J... (A, B, C, D) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 15 | Chemie (NAG) |
Sequence modifications
A, C: 31 - 316 (UniProt: A6NGN9)
B, D: 38 - 324 (UniProt: Q7Z3B1)
| PDB | External Database | Details |
|---|---|---|
| Asp 20 | - | expression tag |
| Tyr 21 | - | expression tag |
| Lys 22 | - | expression tag |
| Asp 23 | - | expression tag |
| Asp 24 | - | expression tag |
| Asp 25 | - | expression tag |
| Asp 26 | - | expression tag |
| Lys 27 | - | expression tag |
| Ala 28 | - | expression tag |
| Ala 29 | - | expression tag |
| Ala 30 | - | expression tag |
| Leu 317 | - | expression tag |
| Glu 318 | - | expression tag |
| Val 319 | - | expression tag |
| Leu 320 | - | expression tag |
| Phe 321 | - | expression tag |
| Gln 322 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Asp 27 | - | expression tag |
| Tyr 28 | - | expression tag |
| Lys 29 | - | expression tag |
| Asp 30 | - | expression tag |
| Asp 31 | - | expression tag |
| Asp 32 | - | expression tag |
| Asp 33 | - | expression tag |
| Lys 34 | - | expression tag |
| Ala 35 | - | expression tag |
| Ala 36 | - | expression tag |
| Ala 37 | - | expression tag |
| Leu 325 | - | expression tag |
| Glu 326 | - | expression tag |
| Val 327 | - | expression tag |
| Leu 328 | - | expression tag |
| Phe 329 | - | expression tag |
| Gln 330 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 133879.5 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 748.7 | |
| Non-Polymers* | Number of molecules | 15 |
| Total formula weight | 3318.1 | |
| All* | Total formula weight | 137946.3 |
