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6D5K

Structure of Human ATP:Cobalamin Adenosyltransferase bound to ATP, and Adenosylcobalamin

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)
Cob(I)yrinic acid a,c-diamide adenosyltransferase, mitochondrialpolymer19621720.73UniProt (Q96EY8)
Pfam (PF01923)
Homo sapiens (Human)Cob(I)alamin adenosyltransferase,Methylmalonic aciduria type B protein
2D, I
(A, B)
5'-DEOXYADENOSINEnon-polymer251.22Chemie (5AD)
3E, F
(A)
COBALAMINnon-polymer1330.42Chemie (B12)
4G, H, J, K, O...
(A, B, C)
SULFATE IONnon-polymer96.16Chemie (SO4)
5L
(C)
ADENOSINE-5'-TRIPHOSPHATEnon-polymer507.21Chemie (ATP)
6M, Q
(C)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
7N
(C)
4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACIDnon-polymer238.31Chemie (EPE)
8R, S, T
(A, B, C)
waterwater18.018Chemie (HOH)
Sequence modifications
A, B, C: 56 - 250 (UniProt: Q96EY8)
PDBExternal DatabaseDetails
Met 55-initiating methionine
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight65162.1
Non-Polymers*Number of molecules14
Total formula weight4533.7
All*Total formula weight69695.7
*Water molecules are not included.

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PDB entries from 2025-06-18

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