6D0Y
X-ray Crystal Structure of PGC-1beta C-terminus bound to the CBP80-CBP20 Cap Binding Complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (C) | Nuclear cap-binding protein subunit 1 | polymer | 782 | 91129.4 | 1 | UniProt (Q09161) Pfam (PF02854) Pfam (PF09088) Pfam (PF09090) | Homo sapiens (Human) | 80 kDa nuclear cap-binding protein,NCBP 80 kDa subunit |
| 2 | B (A) | Nuclear cap-binding protein subunit 2 | polymer | 176 | 20047.4 | 1 | UniProt (P52298) Pfam (PF00076) | Homo sapiens (Human) | 20 kDa nuclear cap-binding protein,Cell proliferation-inducing gene 55 protein,NCBP 20 kDa subunit,CBP20,NCBP-interacting protein 1,NIP1 |
| 3 | C (B) | Peroxisome proliferator-activated receptor gamma coactivator 1-beta | polymer | 31 | 3466.6 | 1 | UniProt (Q86YN6) | Homo sapiens | PPARGC-1-beta,PGC-1-related estrogen receptor alpha coactivator |
| 4 | D (C) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 5 | E (A) | P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE | non-polymer | 787.4 | 1 | Chemie (GTA) | |||
| 6 | F, G, H (C, A, B) | water | water | 18.0 | 274 | Chemie (HOH) |
Sequence modifications
C: 24 - 790 (UniProt: Q09161)
A: 1 - 156 (UniProt: P52298)
B: -9 - 20 (UniProt: Q86YN6)
| PDB | External Database | Details |
|---|---|---|
| Met 23 | - | initiating methionine |
| Val 479 | Ala 479 | conflict |
| Ala 791 | - | expression tag |
| Glu 792 | - | expression tag |
| Asn 793 | - | expression tag |
| Leu 794 | - | expression tag |
| Tyr 795 | - | expression tag |
| Phe 796 | - | expression tag |
| Gln 797 | - | expression tag |
| Gly 798 | - | expression tag |
| His 799 | - | expression tag |
| His 800 | - | expression tag |
| His 801 | - | expression tag |
| His 802 | - | expression tag |
| His 803 | - | expression tag |
| His 804 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly -19 | - | expression tag |
| Pro -18 | - | expression tag |
| Leu -17 | - | expression tag |
| His -16 | - | expression tag |
| Met -15 | - | expression tag |
| Gly -14 | - | expression tag |
| Gly -13 | - | expression tag |
| Ser -12 | - | expression tag |
| Pro -11 | - | expression tag |
| Glu -10 | - | expression tag |
| Phe -9 | - | expression tag |
| Pro -8 | - | expression tag |
| Gly -7 | - | expression tag |
| Arg -6 | - | expression tag |
| Leu -5 | - | expression tag |
| Glu -4 | - | expression tag |
| Ala -3 | - | expression tag |
| Ala -2 | - | expression tag |
| Asp -1 | - | expression tag |
| Pro 0 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Ace -10 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 114643.4 | |
| Non-Polymers* | Number of molecules | 2 |
| Total formula weight | 811.7 | |
| All* | Total formula weight | 115455.1 |






