6D0Y
X-ray Crystal Structure of PGC-1beta C-terminus bound to the CBP80-CBP20 Cap Binding Complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | C | Nuclear cap-binding protein subunit 1 | polymer | 782 | 91129.4 | 1 | UniProt (Q09161) Pfam (PF02854) Pfam (PF09088) Pfam (PF09090) In PDB | Homo sapiens (Human) | 80 kDa nuclear cap-binding protein,NCBP 80 kDa subunit |
2 | A | Nuclear cap-binding protein subunit 2 | polymer | 176 | 20047.4 | 1 | UniProt (P52298) Pfam (PF00076) In PDB | Homo sapiens (Human) | 20 kDa nuclear cap-binding protein,Cell proliferation-inducing gene 55 protein,NCBP 20 kDa subunit,CBP20,NCBP-interacting protein 1,NIP1 |
3 | B | Peroxisome proliferator-activated receptor gamma coactivator 1-beta | polymer | 31 | 3466.6 | 1 | UniProt (Q86YN6) In PDB | Homo sapiens | PPARGC-1-beta,PGC-1-related estrogen receptor alpha coactivator |
4 | C | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
5 | A | P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE | non-polymer | 787.4 | 1 | Chemie (GTA) | |||
6 | water | water | 18.0 | 274 | Chemie (HOH) |
Sequence modifications
C: 24 - 790 (UniProt: Q09161)
A: 1 - 156 (UniProt: P52298)
B: -9 - 20 (UniProt: Q86YN6)
PDB | External Database | Details |
---|---|---|
Met 23 | - | initiating methionine |
Val 479 | Ala 479 | conflict |
Ala 791 | - | expression tag |
Glu 792 | - | expression tag |
Asn 793 | - | expression tag |
Leu 794 | - | expression tag |
Tyr 795 | - | expression tag |
Phe 796 | - | expression tag |
Gln 797 | - | expression tag |
Gly 798 | - | expression tag |
His 799 | - | expression tag |
His 800 | - | expression tag |
His 801 | - | expression tag |
His 802 | - | expression tag |
His 803 | - | expression tag |
His 804 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Gly -19 | - | expression tag |
Pro -18 | - | expression tag |
Leu -17 | - | expression tag |
His -16 | - | expression tag |
Met -15 | - | expression tag |
Gly -14 | - | expression tag |
Gly -13 | - | expression tag |
Ser -12 | - | expression tag |
Pro -11 | - | expression tag |
Glu -10 | - | expression tag |
Phe -9 | - | expression tag |
Pro -8 | - | expression tag |
Gly -7 | - | expression tag |
Arg -6 | - | expression tag |
Leu -5 | - | expression tag |
Glu -4 | - | expression tag |
Ala -3 | - | expression tag |
Ala -2 | - | expression tag |
Asp -1 | - | expression tag |
Pro 0 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ace -10 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 3 |
Total formula weight | 114643.4 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 811.7 | |
All* | Total formula weight | 115455.1 |