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6CYC

PDE2 in complex with compound 5

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BcGMP-dependent 3',5'-cyclic phosphodiesterasepolymer37343694.82UniProt (O00408)
Pfam (PF00233)
In PDB
Homo sapiens (Human)Cyclic GMP-stimulated phosphodiesterase,cGSPDE
2A, BZINC IONnon-polymer65.42Chemie (ZN)
3A, BMAGNESIUM IONnon-polymer24.32Chemie (MG)
4A, B3-(hydroxymethyl)-1-{(1S)-1-[4-(trifluoromethyl)phenyl]ethyl}-1H-pyrazolo[3,4-d]pyrimidine-4,6(5H,7H)-dionenon-polymer354.32Chemie (FKJ)
5A, B1,2-ETHANEDIOLnon-polymer62.111Chemie (EDO)
6waterwater18.0400Chemie (HOH)
Sequence modifications
A, B: 578 - 919 (UniProt: O00408)
PDBExternal DatabaseDetails
Met 547-expression tag
His 548-expression tag
His 549-expression tag
His 550-expression tag
His 551-expression tag
His 552-expression tag
His 553-expression tag
Glu 554-expression tag
Asn 555-expression tag
Leu 556-expression tag
Tyr 557-expression tag
Phe 558-expression tag
Gln 559-expression tag
Gly 560-expression tag
Glu 561-expression tag
Leu 562-expression tag
Ser 563-expression tag
Thr 564-expression tag
Ser 565-expression tag
Leu 566-expression tag
Tyr 567-expression tag
Lys 568-expression tag
Lys 569-expression tag
Ala 570-expression tag
Gly 571-expression tag
Phe 572-expression tag
Asp 573-expression tag
Asp 574-expression tag
Asp 575-expression tag
Asp 576-expression tag
Lys 577-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight87389.6
Non-Polymers*Number of molecules17
Total formula weight1570.7
All*Total formula weight88960.3
*Water molecules are not included.

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PDB entries from 2024-04-24

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