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6BWY

DNA substrate selection by APOBEC3G

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(I, C, D, F)
DNA (30-MER)polymer309357.14synthetic construct
2E, F, G, H
(A, B, E, G)
Protection of telomeres protein 1, DNA dC->dU-editing enzyme APOBEC-3G fusionpolymer36141966.44UniProt (O13988)
UniProt (Q9HC16)
Pfam (PF02765)
Pfam (PF05240)
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)APOBEC-related cytidine deaminase,ARCD,APOBEC-related protein 9,ARP-9,CEM-15,CEM15,Deoxycytidine deaminase,A3G
3AA, I, J, K, L...
(G, I, C, D, F...)
PHOSPHATE IONnon-polymer95.015Chemie (PO4)
4M, Q, T, X
(A, B, E, G)
ZINC IONnon-polymer65.44Chemie (ZN)
5BA, CA, DA, EA, FA...
(I, C, D, A, B...)
waterwater18.057Chemie (HOH)
Sequence modifications
A, B, E, G: 25 - 194 (UniProt: O13988)
PDBExternal DatabaseDetails
Met 24-initiating methionine
A, B, E, G: 195 - 384 (UniProt: Q9HC16)
PDBExternal DatabaseDetails
Lys 234Leu 234engineered mutation
Ala 243Cys 243engineered mutation
Lys 310Phe 310engineered mutation
Ala 321Cys 321engineered mutation
Ala 356Cys 356engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains8
Total formula weight205293.8
Non-Polymers*Number of molecules19
Total formula weight1686.2
All*Total formula weight206980.0
*Water molecules are not included.

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PDB entries from 2025-07-02

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