6BWY
DNA substrate selection by APOBEC3G
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X29A |
Synchrotron site | NSLS |
Beamline | X29A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-12-28 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.075 |
Spacegroup name | P 43 |
Unit cell lengths | 79.072, 79.072, 266.411 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.190 - 2.900 |
R-factor | 0.23665 |
Rwork | 0.234 |
R-free | 0.28692 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ir2 1qzh |
RMSD bond length | 0.019 |
RMSD bond angle | 1.942 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0103) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.190 | 3.000 |
High resolution limit [Å] | 2.900 | 2.900 |
Rmerge | 0.105 | 0.856 |
Rpim | 0.064 | 0.539 |
Number of reflections | 35772 | 3545 |
<I/σ(I)> | 5.1 | 1.1 |
Completeness [%] | 97.5 | |
Redundancy | 3.3 | 3.3 |
CC(1/2) | 0.700 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | BATCH MODE | 298 | 100 mM HEPES pH7, 200 mM LiCl, and 20% (w/v) Polyethylene glycol (PEG) 6000 |