6BEF
Crystal structure of VACV D13 in complex with 3-formyl rifamycin SV
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | Scaffold protein D13 | polymer | 553 | 62076.7 | 3 | UniProt (P68440) Pfam (PF03340) | Vaccinia virus WR (VACV) | 62 kDa protein,Rifampicin resistance protein |
| 2 | D (A) | (2S,12Z,14E,16S,17S,18R,19R,20R,21S,22R,23S,24E)-8-formyl-5,6,9,17,19-pentahydroxy-23-methoxy-2,4,12,16,18,20,22-heptam ethyl-1,11-dioxo-1,2-dihydro-2,7-(epoxypentadeca[1,11,13]trienoimino)naphtho[2,1-b]furan-21-yl acetate | non-polymer | 725.8 | 1 | Chemie (3YI) | |||
| 3 | E, F, I, L, M... (A, B, C) | FORMIC ACID | non-polymer | 46.0 | 8 | Chemie (FMT) | |||
| 4 | G, H, J, K, Q... (A, B, C) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 6 | Chemie (EDO) | |||
| 5 | S, T, U (A, B, C) | water | water | 18.0 | 256 | Chemie (HOH) |
Sequence modifications
A, B, C: 1 - 551 (UniProt: P68440)
| PDB | External Database | Details |
|---|---|---|
| Gly -1 | - | expression tag |
| Ala 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 186230.0 | |
| Non-Polymers* | Number of molecules | 15 |
| Total formula weight | 1466.4 | |
| All* | Total formula weight | 187696.4 |
