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6BEF

Crystal structure of VACV D13 in complex with 3-formyl rifamycin SV

Functional Information from GO Data
ChainGOidnamespacecontents
A0016020cellular_componentmembrane
A0042802molecular_functionidentical protein binding
A0046677biological_processresponse to antibiotic
B0016020cellular_componentmembrane
B0042802molecular_functionidentical protein binding
B0046677biological_processresponse to antibiotic
C0016020cellular_componentmembrane
C0042802molecular_functionidentical protein binding
C0046677biological_processresponse to antibiotic
Functional Information from PDB Data
site_idAC1
Number of Residues13
Detailsbinding site for residue 3YI A 601
ChainResidue
AGLN27
BVAL24
BPHE486
BEDO603
CPHE486
AGLU165
APRO483
APHE486
APHE487
AHOH712
AHOH728
AHOH739
AHOH744

site_idAC2
Number of Residues2
Detailsbinding site for residue FMT A 602
ChainResidue
ATYR283
AASP425

site_idAC3
Number of Residues4
Detailsbinding site for residue FMT A 603
ChainResidue
ALEU477
ATHR478
CGLN35
CTYR36

site_idAC4
Number of Residues5
Detailsbinding site for residue EDO A 604
ChainResidue
ATYR359
AILE395
AHIS516
APRO517
AILE518

site_idAC5
Number of Residues5
Detailsbinding site for residue EDO A 605
ChainResidue
ATHR401
ASER402
AASN405
ATYR407
AASN408

site_idAC6
Number of Residues3
Detailsbinding site for residue FMT B 601
ChainResidue
BASN121
BASN122
BTHR123

site_idAC7
Number of Residues5
Detailsbinding site for residue EDO B 602
ChainResidue
BTYR359
BASN389
BHIS516
BPRO517
BILE518

site_idAC8
Number of Residues2
Detailsbinding site for residue EDO B 603
ChainResidue
A3YI601
BGLU165

site_idAC9
Number of Residues2
Detailsbinding site for residue FMT C 601
ChainResidue
CTYR359
CASN360

site_idAD1
Number of Residues1
Detailsbinding site for residue FMT C 602
ChainResidue
CASP425

site_idAD2
Number of Residues3
Detailsbinding site for residue FMT C 603
ChainResidue
ALYS469
CASN121
CASN122

site_idAD3
Number of Residues1
Detailsbinding site for residue FMT C 604
ChainResidue
CHOH720

site_idAD4
Number of Residues3
Detailsbinding site for residue FMT C 605
ChainResidue
CSER322
CASP325
CASP327

site_idAD5
Number of Residues6
Detailsbinding site for residue EDO C 606
ChainResidue
CTYR359
CILE391
CILE395
CHIS516
CPRO517
CILE518

site_idAD6
Number of Residues2
Detailsbinding site for residue EDO C 607
ChainResidue
CASN203
CHOH733

237735

PDB entries from 2025-06-18

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