Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6A6J

Crystal structure of Zebra fish Y-box protein1 (YB-1) Cold-shock domain in complex with 6mer m5C RNA

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, C)
Zebra fish Y-box protein1 (YB-1)polymer9310127.32UniProt (B5DE31)
Pfam (PF00313)
UniProt (by SIFTS) (P67809)
Danio rerio (Zebrafish)Ybx1 protein
2B, D
(B, D)
RNA (5'-R(P*CP*AP*UP*(5MC)P*U)-3')polymer61827.12Homo sapiens
3E, F
(A, C)
ZINC IONnon-polymer65.42Chemie (ZN)
4G, H, I, J
(A, B, C, D)
waterwater18.051Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight23908.9
Non-Polymers*Number of molecules2
Total formula weight130.8
All*Total formula weight24039.7
*Water molecules are not included.

238268

PDB entries from 2025-07-02

PDB statisticsPDBj update infoContact PDBjnumon