5YKO
Crystal structure of Arabidopsis thaliana JMJ14 catalytic domain in complex with NOG and H3K4me3 peptide
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | Probable lysine-specific demethylase JMJ14 | polymer | 564 | 65001.8 | 1 | UniProt (Q8GUI6) Pfam (PF02375) Pfam (PF02373) Pfam (PF02928) In PDB | Arabidopsis thaliana (Mouse-ear cress) | Jumonji domain-containing protein 14,Jumonji domain-containing protein 4,Lysine-specific histone demethylase JMJ14,Protein JUMONJI 14 |
| 2 | P | H3(1-10)K4me3 peptide | polymer | 10 | 1192.4 | 1 | UniProt (P59226) In PDB | Arabidopsis thaliana | |
| 3 | A | NICKEL (II) ION | non-polymer | 58.7 | 1 | Chemie (NI) | |||
| 4 | A | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 5 | A | N-OXALYLGLYCINE | non-polymer | 147.1 | 1 | Chemie (OGA) |
Sequence modifications
A: 35 - 597 (UniProt: Q8GUI6)
| PDB | External Database | Details |
|---|---|---|
| Ser 34 | - | expression tag |
| Ala 180 | Glu 180 | engineered mutation |
| Ala 181 | Glu 181 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 66194.2 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 336.6 | |
| All* | Total formula weight | 66530.8 |
