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5YEG

Crystal structure of CTCF ZFs4-8-Hs5-1a complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
Transcriptional repressor CTCFpolymer14216825.61UniProt (P49711)
Pfam (PF00096)
Homo sapiens (Human)11-zinc finger protein,CCCTC-binding factor,CTCFL paralog
2B
(B)
Transcriptional repressor CTCFpolymer14116696.41UniProt (P49711)
Pfam (PF00096)
Homo sapiens (Human)11-zinc finger protein,CCCTC-binding factor,CTCFL paralog
3C, E
(D, E)
DNA (5'-D(*TP*CP*GP*CP*CP*CP*TP*CP*TP*GP*CP*TP*GP*GP*TP*TP*AP*AP*AP*G)-3')polymer216405.12synthetic construct
4D, F
(C, F)
DNA (5'-D(*AP*CP*TP*TP*TP*AP*AP*CP*CP*AP*GP*CP*AP*GP*AP*GP*GP*GP*CP*G)-3')polymer206168.02synthetic construct
5G, H, I, J, K...
(A, B)
ZINC IONnon-polymer65.410Chemie (ZN)
6Q, R, S, T, U...
(A, B, D, C, E...)
waterwater18.0607Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight58668.2
Non-Polymers*Number of molecules10
Total formula weight654.1
All*Total formula weight59322.3
*Water molecules are not included.

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PDB entries from 2025-06-18

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