5XUZ
Crystal structure of Lachnospiraceae bacterium ND2006 Cpf1 in complex with crRNA and target DNA (CCCA PAM)
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, E | LbCpf1 | polymer | 1231 | 144170.6 | 2 | Pfam (PF18501) Pfam (PF21918) Pfam (PF22222) Pfam (PF18516) Pfam (PF18510) UniProt (by SIFTS) (A0A182DWE3) In PDB | Lachnospiraceae bacterium ND2006 | |
| 2 | B, F | crRNA | polymer | 40 | 12879.6 | 2 | synthetic construct | ||
| 3 | C, G | DNA (29-MER) | polymer | 29 | 8920.7 | 2 | synthetic construct | Target DNA strand | |
| 4 | D, H | DNA (5'-D(*CP*GP*TP*CP*CP*CP*CP*CP*A)-3') | polymer | 9 | 2636.7 | 2 | synthetic construct | Non-target DNA strand | |
| 5 | A, E | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 6 | A, B, E, F | 1,2-ETHANEDIOL | non-polymer | 62.1 | 4 | Chemie (EDO) | |||
| 7 | B, C, F | SODIUM ION | non-polymer | 23.0 | 3 | Chemie (NA) | |||
| 8 | water | water | 18.0 | 455 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 337215.5 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 365.9 | |
| All* | Total formula weight | 337581.3 |
