5WY8
Crystal structure of PTP delta Ig1-Ig3 in complex with IL1RAPL1 Ig1-Ig3
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Receptor-type tyrosine-protein phosphatase delta | polymer | 298 | 32730.0 | 1 | UniProt (P23468) Pfam (PF07679) Pfam (PF13927) | Homo sapiens (Human) | R-PTP-delta |
| 2 | B (B) | Interleukin-1 receptor accessory protein-like 1 | polymer | 323 | 37010.0 | 1 | UniProt (Q9NZN1) Pfam (PF18452) Pfam (PF00047) | Homo sapiens (Human) | IL1RAPL-1,Oligophrenin-4,Three immunoglobulin domain-containing IL-1 receptor-related 2,TIGIRR-2,X-linked interleukin-1 receptor accessory protein-like 1 |
| 3 | C (C) | alpha-L-fucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 367.3 | 1 | In PDB GlyTouCan (G80587NA) | |||
| 4 | D, E, G (D, E, G) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 3 | In PDB GlyTouCan (G42666HT) | |||
| 5 | F (F) | alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 748.7 | 1 | In PDB GlyTouCan (G81315DD) | |||
| 6 | H, I (A, B) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
| 7 | J, K, L (B) | ZINC ION | non-polymer | 65.4 | 3 | Chemie (ZN) | |||
| 8 | M, N (A, B) | water | water | 18.0 | 6 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 69739.9 | |
| Branched | Number of molecules | 5 |
| Total formula weight | 2389.2 | |
| Non-Polymers* | Number of molecules | 5 |
| Total formula weight | 638.6 | |
| All* | Total formula weight | 72767.8 |
