5WY8
Crystal structure of PTP delta Ig1-Ig3 in complex with IL1RAPL1 Ig1-Ig3
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
Synchrotron site | PAL/PLS |
Beamline | 7A (6B, 6C1) |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-07-04 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 0.97934 |
Spacegroup name | P 32 1 2 |
Unit cell lengths | 110.416, 110.416, 210.536 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.892 - 3.070 |
R-factor | 0.2341 |
Rwork | 0.233 |
R-free | 0.25460 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.976 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHENIX |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.110 |
High resolution limit [Å] | 3.000 | 6.460 | 3.000 |
Rmerge | 0.094 | 0.048 | 0.571 |
Total number of observations | 223878 | ||
Number of reflections | 28613 | 2987 | 2692 |
<I/σ(I)> | 11.7 | ||
Completeness [%] | 97.9 | 97.9 | 93.8 |
Redundancy | 7.8 | 8.7 | 6.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 296 | 100mM Tris-Cl, PH7.5, 200mM zinc acetate, 10% PEG 8000(v/v) |