5W0R
Crystal structure of MBP fused activation-induced cytidine deaminase (AID) in complex with cacodylic acid
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | B, A | MBP fused activation-induced cytidine deaminase | polymer | 549 | 61659.9 | 2 | UniProt (P0AEY0) UniProt (Q9GZX7) Pfam (PF01547) Pfam (PF08210) UniProt (by SIFTS) (P0AEX9) In PDB | Escherichia coli O157:H7 | |
2 | B, A | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
3 | B, A | CACODYLATE ION | non-polymer | 137.0 | 2 | Chemie (CAC) | |||
4 | B, A | CALCIUM ION | non-polymer | 40.1 | 2 | Chemie (CA) | |||
5 | water | water | 18.0 | 179 | Chemie (HOH) |
Sequence modifications
B, A: 2 - 367 (UniProt: P0AEY0)
B, A: 1013 - 1181 (UniProt: Q9GZX7)
PDB | External Database | Details |
---|---|---|
Met 1 | - | initiating methionine |
Ala 83 | Asp 108 | engineered mutation |
Ala 84 | Lys 109 | engineered mutation |
Ala 173 | Glu 198 | engineered mutation |
Ala 174 | Asn 199 | engineered mutation |
Ala 240 | Lys 265 | engineered mutation |
Ala 360 | Glu 385 | engineered mutation |
Ala 363 | Lys 388 | engineered mutation |
Ala 364 | Asp 389 | engineered mutation |
Asn 368 | - | linker |
Ala 369 | - | linker |
Ala 370 | - | linker |
Ala 371 | - | linker |
Glu 372 | - | linker |
Phe 373 | - | linker |
Met 1006 | - | linker |
Asp 1007 | - | linker |
Pro 1008 | - | linker |
Ala 1009 | - | linker |
Thr 1010 | - | linker |
Phe 1011 | - | linker |
Thr 1012 | - | linker |
PDB | External Database | Details |
---|---|---|
Glu 1042 | Phe 42 | engineered mutation |
Ala 1058 | Glu 58 | engineered mutation |
Ala 1130 | His 130 | engineered mutation |
Glu 1131 | Arg 131 | engineered mutation |
Tyr 1141 | Phe 141 | engineered mutation |
Glu 1145 | Phe 145 | engineered mutation |
Gln 1181 | Leu 181 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 123319.8 | |
Non-Polymers* | Number of molecules | 6 |
Total formula weight | 485.0 | |
All* | Total formula weight | 123804.7 |