5VVI
Crystal Structure of the Ligand Binding Domain of LysR-type Transcriptional Regulator, OccR from Agrobacterium tumefaciens in the Complex with Octopine
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C (A, B, C) | Octopine catabolism/uptake operon regulatory protein OccR | polymer | 210 | 23295.6 | 3 | UniProt (P0A4T4) Pfam (PF03466) | Agrobacterium tumefaciens (strain Ach5) | |
| 2 | D, F, I (A, B, C) | octopine | non-polymer | 246.3 | 3 | Chemie (6DB) | |||
| 3 | E, G (A, B) | 1,2-ETHANEDIOL | non-polymer | 62.1 | 2 | Chemie (EDO) | |||
| 4 | H (B) | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
| 5 | J (C) | ACETIC ACID | non-polymer | 60.1 | 1 | Chemie (ACY) | |||
| 6 | K, L, M (A, B, C) | water | water | 18.0 | 98 | Chemie (HOH) |
Sequence modifications
A, B, C: 92 - 298 (UniProt: P0A4T4)
| PDB | External Database | Details |
|---|---|---|
| Ser 89 | - | expression tag |
| Asn 90 | - | expression tag |
| Ala 91 | - | expression tag |
| Glu 261 | Gly 261 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 3 |
| Total formula weight | 69886.9 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 958.4 | |
| All* | Total formula weight | 70845.3 |
