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5VVI

Crystal Structure of the Ligand Binding Domain of LysR-type Transcriptional Regulator, OccR from Agrobacterium tumefaciens in the Complex with Octopine

Functional Information from GO Data
ChainGOidnamespacecontents
A0006355biological_processregulation of DNA-templated transcription
B0006355biological_processregulation of DNA-templated transcription
C0006355biological_processregulation of DNA-templated transcription
Functional Information from PDB Data
site_idAC1
Number of Residues15
Detailsbinding site for residue 6DB A 301
ChainResidue
AMSE98
ASER221
AASP238
AGLU261
AHOH404
AHOH410
AHOH429
APRO99
AALA100
ASER129
AASP147
AGLN193
APHE199
ASER219
ALEU220

site_idAC2
Number of Residues6
Detailsbinding site for residue EDO A 302
ChainResidue
APRO99
APRO99
AGLY126
AGLY126
APRO128
APRO128

site_idAC3
Number of Residues4
Detailsbinding site for residue EDO B 302
ChainResidue
BHIS172
BGLU188
BARG189
BGLY233

site_idAC4
Number of Residues2
Detailsbinding site for residue CL B 303
ChainResidue
BTHR195
BGLY196

site_idAC5
Number of Residues15
Detailsbinding site for residue 6DB C 301
ChainResidue
CMSE98
CPRO99
CALA100
CSER129
CASP147
CGLN193
CPHE199
CSER219
CLEU220
CSER221
CASP238
CGLU261
CHOH401
CHOH406
CHOH407

site_idAC6
Number of Residues7
Detailsbinding site for residue ACY C 302
ChainResidue
BPRO99
BGLY126
BLEU127
BPRO128
CPRO99
CLEU127
CPRO128

site_idAC7
Number of Residues15
Detailsbinding site for Di-peptide 6DB B 301 and ASP B 147
ChainResidue
BMSE98
BPRO99
BALA100
BPRO128
BSER129
BALA146
BGLY148
BPRO149
BGLN150
BSER219
BLEU220
BSER221
BASP238
BHOH406
BHOH429

226707

PDB entries from 2024-10-30

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