5UN1
Crystal structure of GluN1/GluN2B delta-ATD NMDA receptor
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, E, G (G, A, E, C) | N-methyl-D-aspartate receptor subunit NR1-3a | polymer | 451 | 51107.8 | 4 | UniProt (C0KD15) Pfam (PF10613) Pfam (PF00060) UniProt (by SIFTS) (A0A1L8F5J9) | Xenopus laevis (African clawed frog) | |
| 2 | C, D, F, H (B, H, F, D) | Ionotropic glutamate receptor subunit NR2B | polymer | 448 | 50169.0 | 4 | UniProt (A7XY94) Pfam (PF10613) Pfam (PF00060) | Xenopus laevis (African clawed frog) | |
| 3 | I, P (G, A) | GLYCINE | non-polymer | 75.1 | 2 | Chemie (GLY) PubChem (750) | |||
| 4 | J, R, U, W, X... (G, B, H, F, D) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 6 | Chemie (NAG) | |||
| 5 | K (G) | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | non-polymer | 122.1 | 1 | Chemie (TRS) PubChem (3777159) | |||
| 6 | L, N, Q, T, Y (G, B, H, D) | GLUTAMIC ACID | non-polymer | 147.1 | 5 | Chemie (GLU) PubChem (611) PubChem (23327) PubChem (33032) | |||
| 7 | M, S (G, B) | (5S,10R)-5-methyl-10,11-dihydro-5H-5,10-epiminodibenzo[a,d][7]annulene | non-polymer | 221.3 | 2 | Chemie (BMK) PubChem (1207) PubChem (44265977) PubChem (51014940) PubChem (54024991) PubChem (180081) PubChem (5282254) PubChem (6337640) PubChem (9819165) PubChem (9862634) | |||
| 8 | O (A) | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) PubChem (888) | |||
| 9 | V (E) | CHOLESTEROL HEMISUCCINATE | non-polymer | 486.7 | 1 | Chemie (Y01) PubChem (16219150) PubChem (22210610) PubChem (65082) PubChem (45489984) PubChem (363416) PubChem (60078761) PubChem (500055) PubChem (73440805) PubChem (57163942) PubChem (89891013) PubChem (99567468) PubChem (124427194) PubChem (124897021) PubChem (124897020) PubChem (10005657) PubChem (130340716) PubChem (99567469) PubChem (11969853) PubChem (137392566) PubChem (137496323) PubChem (124301053) PubChem (124302591) PubChem (124303794) PubChem (124421343) PubChem (124427195) PubChem (13301926) PubChem (13301927) PubChem (124914595) PubChem (124914596) PubChem (155804219) PubChem (169132514) PubChem (131705526) PubChem (137332121) PubChem (137496357) PubChem (146157332) PubChem (154929912) PubChem (155199678) PubChem (156327905) PubChem (156426247) PubChem (156516588) PubChem (166979870) PubChem (167024614) PubChem (169132513) PubChem (170117245) PubChem (172400028) |
Sequence modifications
G, A, E, C: 394 - 828 (UniProt: C0KD15)
B, H, F, D: 396 - 825 (UniProt: A7XY94)
| PDB | External Database | Details |
|---|---|---|
| Asp 440 | Asn 440 | conflict |
| Asp 469 | Asn 469 | conflict |
| Ala 493 | Lys 493 | conflict |
| Ala 494 | Lys 494 | conflict |
| Ala 495 | Glu 495 | conflict |
| - | Lys 588 | deletion |
| - | Val 589 | deletion |
| - | Asn 590 | deletion |
| - | Ser 591 | deletion |
| - | Glu 592 | deletion |
| - | Glu 593 | deletion |
| - | Glu 594 | deletion |
| - | Glu 595 | deletion |
| Arg 602 | Gly 610 | conflict |
| Leu 609 | Ile 617 | conflict |
| Arg 648 | Asp 656 | conflict |
| Glu 761 | Asn 769 | conflict |
| Ser 829 | - | expression tag |
| Arg 830 | - | expression tag |
| Ala 831 | - | expression tag |
| Glu 832 | - | expression tag |
| Ala 833 | - | expression tag |
| Lys 834 | - | expression tag |
| Arg 835 | - | expression tag |
| Met 836 | - | expression tag |
| Lys 837 | - | expression tag |
| Gly 838 | - | expression tag |
| Leu 839 | - | expression tag |
| Glu 840 | - | expression tag |
| Val 841 | - | expression tag |
| Leu 842 | - | expression tag |
| Phe 843 | - | expression tag |
| Gln 844 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Val 486 | Thr 490 | conflict |
| - | Arg 584 | deletion |
| - | Cys 585 | deletion |
| - | Leu 586 | deletion |
| - | Ala 587 | deletion |
| - | Asp 588 | deletion |
| - | Gly 589 | deletion |
| - | Arg 590 | deletion |
| - | Glu 591 | deletion |
| - | Pro 592 | deletion |
| - | Gly 593 | deletion |
| Leu 601 | Val 615 | conflict |
| Arg 640 | Glu 654 | conflict |
| Arg 641 | Glu 655 | conflict |
| Tyr 826 | - | expression tag |
| Lys 827 | - | expression tag |
| Ser 828 | - | expression tag |
| Arg 829 | - | expression tag |
| Ala 830 | - | expression tag |
| Glu 831 | - | expression tag |
| Ala 832 | - | expression tag |
| Lys 833 | - | expression tag |
| Arg 834 | - | expression tag |
| Met 835 | - | expression tag |
| Lys 836 | - | expression tag |
| Gly 837 | - | expression tag |
| Leu 838 | - | expression tag |
| Glu 839 | - | expression tag |
| Val 840 | - | expression tag |
| Leu 841 | - | expression tag |
| Phe 842 | - | expression tag |
| Gln 843 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 405107.0 | |
| Non-Polymers* | Number of molecules | 18 |
| Total formula weight | 3288.8 | |
| All* | Total formula weight | 408395.7 |
