5UN1
Crystal structure of GluN1/GluN2B delta-ATD NMDA receptor
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | G, A, E, C | N-methyl-D-aspartate receptor subunit NR1-3a | polymer | 451 | 51107.8 | 4 | UniProt (C0KD15) Pfam (PF10613) Pfam (PF00060) UniProt (by SIFTS) (A0A1L8F5J9) In PDB | Xenopus laevis (African clawed frog) | |
| 2 | B, H, F, D | Ionotropic glutamate receptor subunit NR2B | polymer | 448 | 50169.0 | 4 | UniProt (A7XY94) Pfam (PF10613) Pfam (PF00060) In PDB | Xenopus laevis (African clawed frog) | |
| 3 | G, A | GLYCINE | non-polymer | 75.1 | 2 | Chemie (GLY) | |||
| 4 | G, B, H, F, D | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 6 | Chemie (NAG) | |||
| 5 | G | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL | non-polymer | 122.1 | 1 | Chemie (TRS) | |||
| 6 | G, B, H, D | GLUTAMIC ACID | non-polymer | 147.1 | 5 | Chemie (GLU) | |||
| 7 | G, B | (5S,10R)-5-methyl-10,11-dihydro-5H-5,10-epiminodibenzo[a,d][7]annulene | non-polymer | 221.3 | 2 | Chemie (BMK) | |||
| 8 | A | MAGNESIUM ION | non-polymer | 24.3 | 1 | Chemie (MG) | |||
| 9 | E | CHOLESTEROL HEMISUCCINATE | non-polymer | 486.7 | 1 | Chemie (Y01) |
Sequence modifications
G, A, E, C: 394 - 828 (UniProt: C0KD15)
B, H, F, D: 396 - 825 (UniProt: A7XY94)
| PDB | External Database | Details |
|---|---|---|
| Asp 440 | Asn 440 | conflict |
| Asp 469 | Asn 469 | conflict |
| Ala 493 | Lys 493 | conflict |
| Ala 494 | Lys 494 | conflict |
| Ala 495 | Glu 495 | conflict |
| - | Lys 588 | deletion |
| - | Val 589 | deletion |
| - | Asn 590 | deletion |
| - | Ser 591 | deletion |
| - | Glu 592 | deletion |
| - | Glu 593 | deletion |
| - | Glu 594 | deletion |
| - | Glu 595 | deletion |
| Arg 602 | Gly 610 | conflict |
| Leu 609 | Ile 617 | conflict |
| Arg 648 | Asp 656 | conflict |
| Glu 761 | Asn 769 | conflict |
| Ser 829 | - | expression tag |
| Arg 830 | - | expression tag |
| Ala 831 | - | expression tag |
| Glu 832 | - | expression tag |
| Ala 833 | - | expression tag |
| Lys 834 | - | expression tag |
| Arg 835 | - | expression tag |
| Met 836 | - | expression tag |
| Lys 837 | - | expression tag |
| Gly 838 | - | expression tag |
| Leu 839 | - | expression tag |
| Glu 840 | - | expression tag |
| Val 841 | - | expression tag |
| Leu 842 | - | expression tag |
| Phe 843 | - | expression tag |
| Gln 844 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Val 486 | Thr 490 | conflict |
| - | Arg 584 | deletion |
| - | Cys 585 | deletion |
| - | Leu 586 | deletion |
| - | Ala 587 | deletion |
| - | Asp 588 | deletion |
| - | Gly 589 | deletion |
| - | Arg 590 | deletion |
| - | Glu 591 | deletion |
| - | Pro 592 | deletion |
| - | Gly 593 | deletion |
| Leu 601 | Val 615 | conflict |
| Arg 640 | Glu 654 | conflict |
| Arg 641 | Glu 655 | conflict |
| Tyr 826 | - | expression tag |
| Lys 827 | - | expression tag |
| Ser 828 | - | expression tag |
| Arg 829 | - | expression tag |
| Ala 830 | - | expression tag |
| Glu 831 | - | expression tag |
| Ala 832 | - | expression tag |
| Lys 833 | - | expression tag |
| Arg 834 | - | expression tag |
| Met 835 | - | expression tag |
| Lys 836 | - | expression tag |
| Gly 837 | - | expression tag |
| Leu 838 | - | expression tag |
| Glu 839 | - | expression tag |
| Val 840 | - | expression tag |
| Leu 841 | - | expression tag |
| Phe 842 | - | expression tag |
| Gln 843 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 405107.0 | |
| Non-Polymers* | Number of molecules | 18 |
| Total formula weight | 3288.8 | |
| All* | Total formula weight | 408395.7 |
