5U4J
Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | a | 16S rRNA | polymer | 1533 | 497075.8 | 1 | GenBank (817573384) | Escherichia coli | |
| 2 | A | 23S rRNA | polymer | 2904 | 941790.6 | 1 | GenBank (42756) | Escherichia coli | |
| 3 | c | 30S ribosomal protein S3 | polymer | 233 | 26031.3 | 1 | UniProt (P0A7V3) Pfam (PF07650) Pfam (PF00189) In PDB | Escherichia coli | |
| 4 | d | 30S ribosomal protein S4 | polymer | 206 | 23514.2 | 1 | UniProt (P0A7V8) Pfam (PF00163) Pfam (PF01479) In PDB | Escherichia coli | |
| 5 | e | 30S ribosomal protein S5 | polymer | 167 | 17629.4 | 1 | UniProt (P0A7W1) Pfam (PF00333) Pfam (PF03719) In PDB | Escherichia coli | |
| 6 | z | mRNA | polymer | 18 | 5922.6 | 1 | Escherichia coli | ||
| 7 | x | P-site tRNA fMet | polymer | 77 | 24786.8 | 1 | GenBank (687670942) | Escherichia coli | |
| 8 | l | 30S ribosomal protein S12 | polymer | 124 | 13768.2 | 1 | UniProt (P0A7S3) Pfam (PF00164) In PDB | Escherichia coli | |
| 9 | v | Peptide chain release factor 2 | polymer | 383 | 43299.8 | 1 | UniProt (P07012) Pfam (PF03462) Pfam (PF00472) In PDB | Escherichia coli | RF-2 |
| 10 | w | Alternative ribosome-rescue factor A | polymer | 57 | 6513.4 | 1 | UniProt (P36675) Pfam (PF03889) In PDB | Escherichia coli |
Sequence modifications
A: 1 - 2904 (GenBank: 42756)
v: 1 - 365 (UniProt: P07012)
w: 1 - 55 (UniProt: P36675)
| PDB | External Database | Details |
|---|---|---|
| A 887 | U 887 | conflict |
| PDB | External Database | Details |
|---|---|---|
| His -17 | - | expression tag |
| His -16 | - | expression tag |
| His -15 | - | expression tag |
| His -14 | - | expression tag |
| His -13 | - | expression tag |
| His -12 | - | expression tag |
| Ser -11 | - | expression tag |
| Ala -10 | - | expression tag |
| Ala -9 | - | expression tag |
| Leu -8 | - | expression tag |
| Glu -7 | - | expression tag |
| Val -6 | - | expression tag |
| Leu -5 | - | expression tag |
| Phe -4 | - | expression tag |
| Gln -3 | - | expression tag |
| Gly -2 | - | expression tag |
| Pro -1 | - | expression tag |
| Gly 0 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly -1 | - | expression tag |
| Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 10 |
| Total formula weight | 1600332.2 | |
| All* | Total formula weight | 1600332.2 |
