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5TZT

Crystal structure of human CD47 ECD bound to Fab of C47B161

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(B, L)
Light Chain of Fab C47B161polymer21924141.02Homo sapiens
2B, D
(A, H)
Heavy Chain of Fab C47B161polymer22624311.22Homo sapiens
3E, F
(C, D)
Leukocyte surface antigen CD47polymer12914747.52UniProt (Q08722)
Pfam (PF08204)
Homo sapiens (Human)Antigenic surface determinant protein OA3,Integrin-associated protein,IAP,Protein MER6
4G, H, I, J, K
(B, A, L, H)
GLYCEROLnon-polymer92.15Chemie (GOL)
5L, M, N
(C, D)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.23Chemie (NAG)
6O, P, Q, R, S...
(B, A, L, H, C...)
waterwater18.0118Chemie (HOH)
Sequence modifications
C, D: 1 - 123 (UniProt: Q08722)
PDBExternal DatabaseDetails
Gly 15Cys 33engineered mutation
His 124-expression tag
His 125-expression tag
His 126-expression tag
His 127-expression tag
His 128-expression tag
His 129-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight126399.4
Non-Polymers*Number of molecules8
Total formula weight1124.1
All*Total formula weight127523.5
*Water molecules are not included.

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PDB entries from 2025-06-18

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