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5TY2

Crystal structure of S. aureus penicillin binding protein 4 (PBP4) mutant (E183A, F241R) in complex with nafcillin

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Penicillin-binding protein 4polymer35940203.42UniProt (A0A0H2WY27)
Pfam (PF00144)
Pfam (PF00768)
Pfam (PF09211)
Staphylococcus aureus (strain COL)
2C, H
(A, B)
(2R,4S)-2-[(1R)-1-{[(2-ethoxynaphthalen-1-yl)carbonyl]amino}-2-oxoethyl]-5,5-dimethyl-1,3-thiazolidine-4-carboxylic acidnon-polymer416.52Chemie (NFF)
3D, E, F, I
(A, B)
ZINC IONnon-polymer65.44Chemie (ZN)
4G, J
(A, B)
CHLORIDE IONnon-polymer35.52Chemie (CL)
5K
(B)
SODIUM IONnon-polymer23.01Chemie (NA)
6L, M
(A, B)
waterwater18.0609Chemie (HOH)
Sequence modifications
A, B: 25 - 383 (UniProt: A0A0H2WY27)
PDBExternal DatabaseDetails
Ala 183Glu 183engineered mutation
Arg 241Phe 241engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight80406.8
Non-Polymers*Number of molecules9
Total formula weight1188.5
All*Total formula weight81595.3
*Water molecules are not included.

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PDB entries from 2025-06-18

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