5TJ2
Gasdermin-B C-terminal domain containing the polymorphism residues Gly299:Ser306 fused to maltose binding protein
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Sugar ABC transporter substrate-binding protein,Gasdermin-B fusion protein | polymer | 553 | 60461.6 | 4 | UniProt (A0A178SBV6) UniProt (Q8TAX9) Pfam (PF17708) | Escherichia coli | Gasdermin-like protein |
| 2 | E, F, G, H (E, F, G, H) | alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose | branched | 342.3 | 4 | In PDB BIRD (PRD_900001) GlyTouCan (G07411ON) | alpha-maltose | ||
| 3 | I, J, K, L (A, B, C, D) | water | water | 18.0 | 37 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 366 (UniProt: A0A178SBV6)
A, B, C, D: 1220 - 1406 (UniProt: Q8TAX9)
| PDB | External Database | Details |
|---|---|---|
| Ala 82 | Asp 108 | conflict |
| Ala 83 | Lys 109 | conflict |
| Ala 172 | Glu 198 | conflict |
| Ala 173 | Asn 199 | conflict |
| Ala 239 | Lys 265 | conflict |
| Ala 362 | Lys 388 | conflict |
| Ala 363 | Asp 389 | conflict |
| Asn 367 | - | linker |
| Ala 368 | - | linker |
| Ala 369 | - | linker |
| Ala 370 | - | linker |
| PDB | External Database | Details |
|---|---|---|
| Ser 1306 | Pro 306 | engineered mutation |
| - | Asp 379 | deletion |
| - | Met 380 | deletion |
| - | Asp 381 | deletion |
| - | Tyr 382 | deletion |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 241846.2 | |
| Branched | Number of molecules | 4 |
| Total formula weight | 1369.2 | |
| All* | Total formula weight | 243215.4 |
