5TIP

The Structure of the Major Capsid protein of PBCV-1

Replaces:  1M3Y

Entity

Entity ID	Chain ID	Description	Type	Chain length	Formula weight	Number of molecules	DB Name (Accession)	Biological source	Descriptive keywords
1	A, B, C, D	Major capsid protein	polymer	436	48068.4	4	UniProt (P30328) Pfam (PF16903) Pfam (PF04451) In PDB	Paramecium bursaria Chlorella virus 1 (PBCV-1)	MCP, VP54
2	E, F, J, N, Q	6-deoxy-2,3-di-O-methyl-alpha-L-mannopyranose-(1-2)-beta-L-rhamnopyranose-(1-4)-beta-D-xylopyranose-(1-4)-[alpha-D-mannopyranose-(1-3)-alpha-D-rhamnopyranose-(1-3)][alpha-D-galactopyranose-(1-2)]alpha-L-fucopyranose-(1-3)-[beta-D-xylopyranose-(1-4)]beta-D-glucopyranose	branched		1381.3	5	In PDB GlyTouCan (G08707KI)
3	G, K, M, O, R	alpha-D-mannopyranose-(1-3)-alpha-D-rhamnopyranose-(1-3)-[alpha-D-galactopyranose-(1-2)][beta-D-xylopyranose-(1-4)]alpha-L-fucopyranose-(1-3)-[beta-D-xylopyranose-(1-4)]beta-D-glucopyranose	branched		1060.9	5	In PDB GlyTouCan (G22683EH)
4	H, L, S	alpha-L-fucopyranose-(1-3)-beta-D-glucopyranose	branched		326.3	3	In PDB GlyTouCan (G08796XG)
5	I	beta-L-rhamnopyranose-(1-4)-beta-D-xylopyranose-(1-4)-[alpha-D-galactopyranose-(1-2)][alpha-D-rhamnopyranose-(1-3)]alpha-L-fucopyranose-(1-3)-[beta-D-xylopyranose-(1-4)]beta-D-glucopyranose	branched		1044.9	1	In PDB GlyTouCan (G08201UK)
6	P	alpha-D-mannopyranose-(1-3)-alpha-D-rhamnopyranose-(1-3)-[beta-L-rhamnopyranose-(1-4)-beta-D-xylopyranose-(1-4)][alpha-D-galactopyranose-(1-2)]alpha-L-fucopyranose-(1-3)-[beta-D-xylopyranose-(1-4)]beta-D-glucopyranose	branched		1207.1	1	In PDB GlyTouCan (G88961XM)
7	A, B, C, D	MERCURY (II) ION	non-polymer		200.6	4	Chemie (HG)
8	C	beta-D-glucopyranose	non-polymer		180.2	1	Chemie (BGC)
9		water	water		18.0	1159	Chemie (HOH)

Contents of the asymmetric unit

Polymers	Number of chains	4
	Total formula weight	192273.7
Branched	Number of molecules	15
	Total formula weight	15442.1
Non-Polymers*	Number of molecules	5
	Total formula weight	982.5
All*	Total formula weight	208698.3

*Water molecules are not included.