5T6B
X-ray structure of the KijD1 C3-methyltransfeerase, converted to monomeric form
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D | Sugar 3-C-methyl transferase | polymer | 416 | 45983.8 | 4 | UniProt (B3TMQ9) Pfam (PF08421) Pfam (PF13489) Pfam (PF08484) In PDB | Actinomadura kijaniata | |
2 | A, B, C, D | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
3 | A, B, C, D | S-ADENOSYL-L-HOMOCYSTEINE | non-polymer | 384.4 | 4 | Chemie (SAH) | |||
4 | A, B | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID | non-polymer | 195.2 | 2 | Chemie (MES) | |||
5 | A, B, C, D | THYMIDINE-5'-PHOSPHATE | non-polymer | 322.2 | 4 | Chemie (TMP) | |||
6 | water | water | 18.0 | 737 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 414 (UniProt: B3TMQ9)
PDB | External Database | Details |
---|---|---|
Gln -1 | - | expression tag |
His 0 | - | expression tag |
Met 92 | Lys 92 | engineered mutation |
Arg 95 | Gln 95 | engineered mutation |
Asp 96 | Arg 96 | engineered mutation |
Phe 97 | Leu 97 | engineered mutation |
Pro 105 | Ala 105 | engineered mutation |
Glu 388 | Asp 388 | engineered mutation |
His 398 | Arg 398 | engineered mutation |
His 412 | Arg 412 | engineered mutation |
Ile 413 | Val 413 | engineered mutation |
Arg 414 | Leu 414 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 183935.0 | |
Non-Polymers* | Number of molecules | 14 |
Total formula weight | 3478.6 | |
All* | Total formula weight | 187413.6 |