5T6B
X-ray structure of the KijD1 C3-methyltransfeerase, converted to monomeric form
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Sugar 3-C-methyl transferase | polymer | 416 | 45983.8 | 4 | UniProt (B3TMQ9) | Actinomadura kijaniata | |
| 2 | E, I, M, P (A, B, C, D) | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
| 3 | F, J, N, Q (A, B, C, D) | S-ADENOSYL-L-HOMOCYSTEINE | non-polymer | 384.4 | 4 | Chemie (SAH) PubChem (16760024) PubChem (193) PubChem (25210495) PubChem (13792) PubChem (177678424) PubChem (44361184) PubChem (21125603) PubChem (46936206) PubChem (50989525) PubChem (25203782) PubChem (51380914) PubChem (52224398) PubChem (189149) PubChem (57544532) PubChem (439155) PubChem (59046843) PubChem (59170628) PubChem (59576228) PubChem (66805708) PubChem (70689219) PubChem (70702054) PubChem (70832431) PubChem (52224400) PubChem (5284331) PubChem (6419189) PubChem (118374891) PubChem (118560068) PubChem (71170554) PubChem (13231890) PubChem (164157219) PubChem (126969526) PubChem (129105892) PubChem (143518505) PubChem (154578335) PubChem (163054214) PubChem (163335525) | |||
| 4 | G, K (A, B) | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID | non-polymer | 195.2 | 2 | Chemie (MES) PubChem (4478249) | |||
| 5 | H, L, O, R (A, B, C, D) | THYMIDINE-5'-PHOSPHATE | non-polymer | 322.2 | 4 | Chemie (TMP) PubChem (18531120) PubChem (20711568) PubChem (1139) PubChem (23657880) PubChem (24802545) PubChem (44361457) PubChem (25113134) PubChem (51397487) PubChem (444919) PubChem (9700) PubChem (5274091) PubChem (5748250) PubChem (10147784) PubChem (129069890) PubChem (133126478) PubChem (164603144) | |||
| 6 | S, T, U, V (A, B, C, D) | water | water | 18.0 | 737 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 414 (UniProt: B3TMQ9)
| PDB | External Database | Details |
|---|---|---|
| Gln -1 | - | expression tag |
| His 0 | - | expression tag |
| Met 92 | Lys 92 | engineered mutation |
| Arg 95 | Gln 95 | engineered mutation |
| Asp 96 | Arg 96 | engineered mutation |
| Phe 97 | Leu 97 | engineered mutation |
| Pro 105 | Ala 105 | engineered mutation |
| Glu 388 | Asp 388 | engineered mutation |
| His 398 | Arg 398 | engineered mutation |
| His 412 | Arg 412 | engineered mutation |
| Ile 413 | Val 413 | engineered mutation |
| Arg 414 | Leu 414 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 183935.0 | |
| Non-Polymers* | Number of molecules | 14 |
| Total formula weight | 3478.6 | |
| All* | Total formula weight | 187413.6 |
