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5T6B

X-ray structure of the KijD1 C3-methyltransfeerase, converted to monomeric form

Functional Information from GO Data
ChainGOidnamespacecontents
A0016740molecular_functiontransferase activity
A0046872molecular_functionmetal ion binding
B0016740molecular_functiontransferase activity
B0046872molecular_functionmetal ion binding
C0016740molecular_functiontransferase activity
C0046872molecular_functionmetal ion binding
D0016740molecular_functiontransferase activity
D0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN A 501
ChainResidue
ACYS13
ACYS16
ACYS54
ACYS57

site_idAC2
Number of Residues20
Detailsbinding site for residue SAH A 502
ChainResidue
AGLY113
AASN115
APHE133
AGLU134
APRO135
ASER136
APHE155
AALA176
AASN177
ATHR178
AILE182
ATYR184
AHOH608
AHOH673
AHOH685
APHE72
ATYR76
ASER80
APHE90
AILE112

site_idAC3
Number of Residues9
Detailsbinding site for residue MES A 503
ChainResidue
AARG68
AGLU156
ATYR184
ASER187
AHOH703
CGLY339
CPRO340
CASP341
CHOH674

site_idAC4
Number of Residues9
Detailsbinding site for residue TMP A 504
ChainResidue
ATYR78
ATYR323
AASP348
ATHR349
ATHR350
ALYS353
AHIS386
AILE390
ALYS393

site_idAC5
Number of Residues4
Detailsbinding site for residue ZN B 501
ChainResidue
BCYS13
BCYS16
BCYS54
BCYS57

site_idAC6
Number of Residues20
Detailsbinding site for residue SAH B 502
ChainResidue
BPHE72
BTYR76
BSER80
BPHE90
BILE112
BGLY113
BASN115
BPHE133
BGLU134
BPRO135
BSER136
BPHE154
BPHE155
BALA176
BASN177
BTHR178
BILE182
BTYR184
BHOH617
BHOH646

site_idAC7
Number of Residues10
Detailsbinding site for residue MES B 503
ChainResidue
BARG68
BGLU156
BTYR184
BHOH701
BHOH702
DGLY339
DPRO340
DASP341
DHOH645
DHOH687

site_idAC8
Number of Residues9
Detailsbinding site for residue TMP B 504
ChainResidue
BASP348
BTHR349
BTHR350
BLYS353
BASN385
BHIS386
BLYS393
BHOH601
BHOH605

site_idAC9
Number of Residues4
Detailsbinding site for residue ZN C 501
ChainResidue
CCYS13
CCYS16
CCYS54
CCYS57

site_idAD1
Number of Residues18
Detailsbinding site for residue SAH C 502
ChainResidue
CTHR178
CHIS181
CTYR184
CHOH601
CHOH624
CHOH626
CHOH642
CHOH647
CILE112
CGLY113
CASN115
CGLU134
CPRO135
CSER136
CPHE154
CPHE155
CALA176
CASN177

site_idAD2
Number of Residues12
Detailsbinding site for residue TMP C 503
ChainResidue
CALA325
CLYS328
CASP348
CTHR349
CTHR350
CLYS353
CASN385
CHIS386
CILE390
CLYS393
CHOH656
CHOH678

site_idAD3
Number of Residues4
Detailsbinding site for residue ZN D 501
ChainResidue
DCYS13
DCYS16
DCYS54
DCYS57

site_idAD4
Number of Residues15
Detailsbinding site for residue SAH D 502
ChainResidue
DILE112
DGLY113
DASN115
DGLU134
DPRO135
DPHE154
DPHE155
DALA176
DASN177
DTHR178
DILE182
DHOH634
DHOH662
DHOH672
DHOH676

site_idAD5
Number of Residues12
Detailsbinding site for residue TMP D 503
ChainResidue
DLYS328
DASP348
DTHR349
DTHR350
DLYS353
DASN385
DHIS386
DILE390
DLYS393
DHOH631
DHOH689
DHOH735

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PDB entries from 2024-07-17

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