5T2T
Crystal structure of Lymphocytic choriomeningitis mammarenavirus endonuclease bound to compound L742001
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | RNA-directed RNA polymerase L | polymer | 204 | 23722.2 | 2 | UniProt (A0A059U382) Pfam (PF17296) UniProt (by SIFTS) (P14240) | Lymphocytic choriomeningitis mammarenavirus | Protein L |
| 2 | C, D (A) | MANGANESE (II) ION | non-polymer | 54.9 | 2 | Chemie (MN) | |||
| 3 | E (A) | (2Z)-4-[1-benzyl-4-(4-chlorobenzyl)piperidin-4-yl]-2-hydroxy-4-oxobut-2-enoic acid | non-polymer | 413.9 | 1 | Chemie (0N8) | |||
| 4 | F, G (A, B) | GLYCEROL | non-polymer | 92.1 | 2 | Chemie (GOL) | |||
| 5 | H, I (B) | CHLORIDE ION | non-polymer | 35.5 | 2 | Chemie (CL) | |||
| 6 | J, K (B) | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
| 7 | L, M (A, B) | water | water | 18.0 | 346 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 196 (UniProt: A0A059U382)
| PDB | External Database | Details |
|---|---|---|
| Met -7 | - | initiating methionine |
| Lys -6 | - | expression tag |
| His -5 | - | expression tag |
| His -4 | - | expression tag |
| His -3 | - | expression tag |
| His -2 | - | expression tag |
| His -1 | - | expression tag |
| His 0 | - | expression tag |
| Asp 173 | Asn 174 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 47444.3 | |
| Non-Polymers* | Number of molecules | 9 |
| Total formula weight | 824.8 | |
| All* | Total formula weight | 48269.2 |






