Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5OJO

Sirtuin 5 from Danio rerio in complex with 3-hydroxy-3-methylglutaryl-CPS1 peptide

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BNAD-dependent protein deacylase sirtuin-5, mitochondrialpolymer27530423.82UniProt (Q6DHI5)
Pfam (PF02146)
In PDB
Danio rerio (Zebrafish)Regulatory protein SIR2 homolog 5
2CCarbamoyl-phosphate synthase [ammonia], mitochondrialpolymer81112.21UniProt (P31327)
In PDB
Homo sapiensCarbamoyl-phosphate synthetase I,CPSase I
3ADIMETHYL SULFOXIDEnon-polymer78.11Chemie (DMS)
4A, BZINC IONnon-polymer65.42Chemie (ZN)
5A1,2-ETHANEDIOLnon-polymer62.11Chemie (EDO)
6B4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACIDnon-polymer238.31Chemie (EPE)
7BSODIUM IONnon-polymer23.01Chemie (NA)
8waterwater18.059Chemie (HOH)
Sequence modifications
A, B: 30 - 298 (UniProt: Q6DHI5)
PDBExternal DatabaseDetails
Gly 24-expression tag
Ile 25-expression tag
Asp 26-expression tag
Pro 27-expression tag
Phe 28-expression tag
Thr 29-expression tag
C: 1 - 8 (UniProt: P31327)
PDBExternal DatabaseDetails
Hly 4Lys 527microheterogeneity
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight61959.8
Non-Polymers*Number of molecules6
Total formula weight532.3
All*Total formula weight62492.1
*Water molecules are not included.

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon