5OJO
Sirtuin 5 from Danio rerio in complex with 3-hydroxy-3-methylglutaryl-CPS1 peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | BESSY BEAMLINE 14.1 |
Synchrotron site | BESSY |
Beamline | 14.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-09-08 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.918409 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 87.540, 87.540, 316.920 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.670 - 3.100 |
R-factor | 0.2 |
Rwork | 0.196 |
R-free | 0.26600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4utv |
RMSD bond length | 0.010 |
RMSD bond angle | 1.539 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.200 |
High resolution limit [Å] | 3.100 | 3.100 |
Rmerge | 0.248 | 1.512 |
Number of reflections | 13919 | 1214 |
<I/σ(I)> | 10.2 | 1.6 |
Completeness [%] | 99.9 | 99.9 |
Redundancy | 10.3 | 10.8 |
CC(1/2) | 0.994 | 0.598 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.6 | 293 | 0.1 M HEPES pH 7.6 20% PEG3350 |