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5OJO

Sirtuin 5 from Danio rerio in complex with 3-hydroxy-3-methylglutaryl-CPS1 peptide

Functional Information from GO Data
ChainGOidnamespacecontents
A0036054molecular_functionprotein-malonyllysine demalonylase activity
A0036055molecular_functionprotein-succinyllysine desuccinylase activity
A0070403molecular_functionNAD+ binding
B0036054molecular_functionprotein-malonyllysine demalonylase activity
B0036055molecular_functionprotein-succinyllysine desuccinylase activity
B0070403molecular_functionNAD+ binding
Functional Information from PDB Data
site_idAC1
Number of Residues2
Detailsbinding site for residue DMS A 301
ChainResidue
AALA145
BGLY146

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN A 302
ChainResidue
ACYS162
ACYS165
ACYS203
ACYS208

site_idAC3
Number of Residues3
Detailsbinding site for residue EDO A 303
ChainResidue
AGLN136
AASN137
AASP139

site_idAC4
Number of Residues12
Detailsbinding site for residue EPE B 301
ChainResidue
ATHR229
AGLU232
BALA78
BALA82
BTYR98
BARG101
BHIS154
BVAL217
BTRP218
BPHE219
BGLU221
BTYR251

site_idAC5
Number of Residues4
Detailsbinding site for residue ZN B 302
ChainResidue
BCYS162
BCYS165
BCYS203
BCYS208

site_idAC6
Number of Residues4
Detailsbinding site for residue NA B 303
ChainResidue
BASP224
BASP224
BASP226
BASP226

site_idAC7
Number of Residues13
Detailsbinding site for Di-peptide LEU C 3 and SKH C 4
ChainResidue
ATYR98
AARG101
AHIS154
AVAL216
AVAL217
APHE219
AGLU221
ALEU223
CGZB1
CVAL2
CGLU5
CTYR6
CGLY7

site_idAC8
Number of Residues15
Detailsbinding site for Di-peptide SKH C 4 and GLU C 5
ChainResidue
AARG67
ATYR98
AARG101
AHIS154
AVAL216
AVAL217
APHE219
AGLU221
ALEU223
ATYR251
CVAL2
CLEU3
CTYR6
CGLY7
CVAL8

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues1
DetailsMOD_RES: N6-succinyllysine; alternate => ECO:0000250|UniProtKB:Q8C196
ChainResidueDetails
CHLY4
BHIS154

site_idSWS_FT_FI2
Number of Residues22
DetailsBINDING: BINDING => ECO:0000255|HAMAP-Rule:MF_03160
ChainResidueDetails
AGLY54
AASN271
ACYS289
BGLY54
BTYR98
BARG101
BGLN136
BCYS162
BCYS165
BCYS203
BCYS208
ATYR98
BGLY245
BASN271
BCYS289
AARG101
AGLN136
ACYS162
ACYS165
ACYS203
ACYS208
AGLY245

222415

PDB entries from 2024-07-10

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