5NW4
Human cytoplasmic dynein-1 bound to dynactin and an N-terminal construct of BICD2
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | B | dynein heavy chain | polymer | 889 | 75675.7 | 1 | Homo sapiens (Human) | ||
2 | D | dynein intermediate chain | polymer | 341 | 29038.7 | 1 | Homo sapiens (Human) | ||
3 | C | dynein intermediate chain | polymer | 350 | 29804.6 | 1 | Homo sapiens (Human) | ||
4 | A | dynein heavy chain | polymer | 922 | 78484.1 | 1 | Homo sapiens (Human) | ||
5 | 1 | dynein N-terminal dimerization domain | polymer | 125 | 10656.1 | 1 | Homo sapiens (Human) | ||
6 | 2 | dynein N-terminal dimerization domain | polymer | 124 | 10571.0 | 1 | Homo sapiens (Human) | ||
7 | R, S | Robl | polymer | 120 | 10230.6 | 2 | Homo sapiens (Human) | ||
8 | E | dynein light intermediate chain | polymer | 295 | 25123.8 | 1 | Homo sapiens (Human) | ||
9 | F | dynein light intermediate chain | polymer | 298 | 25379.1 | 1 | Homo sapiens (Human) | ||
10 | G, H, O, P, Q... | Arp1 | polymer | 376 | 42684.7 | 8 | UniProt (F2Z5G5) Pfam (PF00022) In PDB | Sus scrofa (Pig) | |
11 | V | beta-actin | polymer | 396 | 43987.1 | 1 | UniProt (I3LVD5) Pfam (PF00022) UniProt (by SIFTS) (A0A151MAL5) In PDB | Sus scrofa (Pig) | |
12 | X | Arp11 | polymer | 417 | 46250.8 | 1 | UniProt (I3LHK5) Pfam (PF00022) In PDB | Sus scrofa (Pig) | |
13 | Y | Capping protein (Actin filament) muscle Z-line, alpha 1 | polymer | 286 | 33059.8 | 1 | UniProt (A0PFK5) Pfam (PF01267) In PDB | Sus scrofa (Pig) | F-actin capping protein alpha 1 subunit,F-actin capping protein subunit alpha 1 |
14 | Z | F-actin capping protein beta subunit variant II | polymer | 293 | 33060.4 | 1 | UniProt (D2JYW4) Pfam (PF01115) In PDB | Sus scrofa (Pig) | F-actin-capping protein subunit beta,F-actin-capping protein subunit beta isoform 2 |
15 | a | dynactin shoulder complex | polymer | 571 | 48613.0 | 1 | Sus scrofa (Pig) | ||
16 | b | dynactin shoulder complex | polymer | 602 | 51251.3 | 1 | Sus scrofa (Pig) | ||
17 | c, d | dynactin shoulder complex | polymer | 130 | 11081.7 | 2 | Sus scrofa (Pig) | ||
18 | e, f | dynactin shoulder complex | polymer | 174 | 14826.3 | 2 | Sus scrofa (Pig) | ||
19 | g | Dynactin 6 | polymer | 190 | 20703.9 | 1 | UniProt (D0G6S1) In PDB | Sus scrofa (Pig) | |
20 | h | Dynactin subunit 5 | polymer | 222 | 24538.3 | 1 | Pfam (PF21711) UniProt (by SIFTS) (Q9BTE1) In PDB | Sus scrofa (Pig) | Dynactin subunit p25 |
21 | i | dynactin pointed end p62 | polymer | 243 | 20698.4 | 1 | Sus scrofa (Pig) | ||
22 | j | p150 | polymer | 52 | 4443.5 | 1 | Sus scrofa (Pig) | ||
23 | k | Dynactin | polymer | 48 | 5400.0 | 1 | UniProt (A0A0J9X292) In PDB | Sus scrofa (Pig) | Dynactin subunit 2 |
24 | l | Dynactin | polymer | 71 | 7931.8 | 1 | UniProt (A0A0J9X293) Pfam (PF04912) In PDB | Sus scrofa (Pig) | Dynactin subunit 2 |
25 | m | Dynactin | polymer | 31 | 3019.3 | 1 | UniProt (A0A0J9X299) In PDB | Sus scrofa (Pig) | |
26 | n | Dynactin | polymer | 20 | 2237.5 | 1 | UniProt (by SIFTS) (A0A0J9X293) In PDB | Sus scrofa (Pig) | Dynactin subunit 2 |
27 | o | dynactin p150 | polymer | 53 | 4528.6 | 1 | Sus scrofa (Pig) | ||
28 | 5, 6 | BICD2N | polymer | 275 | 23421.8 | 2 | Homo sapiens (Human) |
Sequence modifications
G, H, O, P, Q, T, U, W: 1 - 376 (UniProt: F2Z5G5)
V: 3 - 375 (UniProt: I3LVD5)
Z: 2 - 277 (UniProt: D2JYW4)
PDB | External Database | Details |
---|---|---|
Glu 97 | Asp 97 | conflict |
PDB | External Database | Details |
---|---|---|
Met -20 | - | initiating methionine |
Ser -19 | - | expression tag |
Val -18 | - | expression tag |
Arg -17 | - | expression tag |
Ser -16 | - | expression tag |
Ala -15 | - | expression tag |
Arg -14 | - | expression tag |
Arg -13 | - | expression tag |
Ala -12 | - | expression tag |
Ser -11 | - | expression tag |
Ala -10 | - | expression tag |
Ser -9 | - | expression tag |
Ala -8 | - | expression tag |
Glu -7 | - | expression tag |
Ala -6 | - | expression tag |
Glu -5 | - | expression tag |
Leu -4 | - | expression tag |
Leu -3 | - | expression tag |
Gln -2 | - | expression tag |
Thr -1 | - | expression tag |
Met 0 | - | expression tag |
Gly 1 | - | expression tag |
Asp 2 | - | expression tag |
Val 10 | Ile 10 | conflict |
PDB | External Database | Details |
---|---|---|
Met -15 | - | initiating methionine |
Asp -14 | - | expression tag |
Thr -13 | - | expression tag |
Glu -12 | - | expression tag |
Leu -11 | - | expression tag |
Ala -10 | - | expression tag |
Ser -9 | - | expression tag |
Pro -8 | - | expression tag |
Gly -7 | - | expression tag |
Pro -6 | - | expression tag |
Leu -5 | - | expression tag |
Leu -4 | - | expression tag |
Leu -3 | - | expression tag |
Gly -2 | - | expression tag |
Lys -1 | - | expression tag |
Tyr 0 | - | expression tag |
Arg 1 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 39 |
Total formula weight | 1095055.1 | |
All* | Total formula weight | 1095055.1 |