5NF0
Discovery, crystal structures and atomic force microscopy study of thioether ligated D,L-cyclic antimicrobial peptides against multidrug resistant Pseudomonas aeruginosa
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, C, D (A, B, C, D) | Fucose-binding lectin II (PA-IIL) | polymer | 114 | 11734.7 | 4 | UniProt (A0A069Q9V4) Pfam (PF07472) UniProt (by SIFTS) (Q9HYN5) | Pseudomonas aeruginosa | Fucose-binding lectin PA-IIL |
| 2 | E, G, H (E, G, H) | CYD-TRP-TRD-LYS-LYD-LYS-LYD-LYS-TRD-TRP-CYD-GLY | polymer | 12 | 1611.0 | 3 | synthetic construct | ||
| 3 | F (F) | Fragment of ligand | polymer | 5 | 303.3 | 1 | synthetic construct | ||
| 4 | I, J, K, M, N... (A, B, C, D) | CALCIUM ION | non-polymer | 40.1 | 8 | Chemie (CA) | |||
| 5 | L, P, R, T (A, B, C, D) | 3,7-anhydro-2,8-dideoxy-L-glycero-D-gluco-octonic acid | non-polymer | 206.2 | 4 | Chemie (ZDC) | |||
| 6 | U, V, W (E, G, H) | ORTHO-XYLENE | non-polymer | 106.2 | 3 | Chemie (OXE) | |||
| 7 | AA, BA, CA, DA, EA... (D, E, F, G, H...) | water | water | 18.0 | 591 | Chemie (HOH) |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 8 |
| Total formula weight | 52075.2 | |
| Non-Polymers* | Number of molecules | 15 |
| Total formula weight | 1463.9 | |
| All* | Total formula weight | 53539.1 |
