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5NDH

The structure of the G. violaceus guanidine II riboswitch P2 stem-loop

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C, D
(A, B, C, D)
RNA (5'-R(*GP*(CBV)P*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*GP*C)-3')polymer165245.14Gloeobacter violaceus
2E, H, K, M
(A, B, C, D)
GUANIDINEnon-polymer59.14Chemie (GAI)
3F, I, J, L
(A, B, C)
SODIUM IONnon-polymer23.04Chemie (NA)
4G
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
5N, O
(D)
SULFATE IONnon-polymer96.12Chemie (SO4)
6P, Q, R, S
(A, B, C, D)
waterwater18.081Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight20980.2
Non-Polymers*Number of molecules11
Total formula weight544.7
All*Total formula weight21524.9
*Water molecules are not included.

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PDB entries from 2025-06-18

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