5NCO
Quaternary complex between SRP, SR, and SecYEG bound to the translating ribosome
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (1) | 4.5S SRP RNA (Ffs) | polymer | 104 | 33611.9 | 1 | GenBank (1126835766) | Escherichia coli | |
| 2 | B (2) | P-site tRNA-CCA end | polymer | 3 | 894.6 | 1 | Escherichia coli | ||
| 3 | C (A) | 23S rRNA | polymer | 2903 | 941306.2 | 1 | GenBank (2073407) | Escherichia coli | |
| 4 | D (B) | 5S rRNA | polymer | 120 | 38790.1 | 1 | GenBank (1114321404) | Escherichia coli | |
| 5 | E (C) | 50S ribosomal protein L2 | polymer | 271 | 29663.2 | 1 | UniProt (P60422) Pfam (PF00181) Pfam (PF03947) | Escherichia coli | |
| 6 | F (D) | 50S ribosomal protein L3 | polymer | 209 | 22277.5 | 1 | UniProt (P60438) Pfam (PF00297) | Escherichia coli | |
| 7 | G (E) | 50S ribosomal protein L4 | polymer | 201 | 22121.6 | 1 | UniProt (P60723) Pfam (PF00573) | Escherichia coli | |
| 8 | H (F) | 50S ribosomal protein L5 | polymer | 177 | 20073.2 | 1 | UniProt (P62399) Pfam (PF00281) Pfam (PF00673) | Escherichia coli | |
| 9 | I (G) | 50S ribosomal protein L6 | polymer | 176 | 18801.6 | 1 | UniProt (P0AG55) Pfam (PF00347) | Escherichia coli | |
| 10 | J (H) | 50S ribosomal protein L9 | polymer | 149 | 15789.0 | 1 | UniProt (P0A7R1) Pfam (PF03948) Pfam (PF01281) | Escherichia coli | |
| 11 | K (I) | 50S ribosomal protein L10 | polymer | 125 | 13497.6 | 1 | UniProt (P0A7J3) Pfam (PF00466) | Escherichia coli | 50S ribosomal protein L8 |
| 12 | L (J) | 50S ribosomal protein L11 | polymer | 134 | 14020.3 | 1 | UniProt (P0A7J7) Pfam (PF03946) Pfam (PF00298) | Escherichia coli | |
| 13 | M (K) | 50S ribosomal protein L13 | polymer | 142 | 16050.6 | 1 | UniProt (P0AA10) Pfam (PF00572) | Escherichia coli | |
| 14 | N (L) | 50S ribosomal protein L14 | polymer | 123 | 13565.1 | 1 | UniProt (P0ADY3) Pfam (PF00238) | Escherichia coli | |
| 15 | O (M) | 50S ribosomal protein L15 | polymer | 144 | 15008.5 | 1 | UniProt (P02413) Pfam (PF00828) | Escherichia coli | |
| 16 | P (N) | 50S ribosomal protein L16 | polymer | 136 | 15312.3 | 1 | UniProt (P0ADY7) Pfam (PF00252) | Escherichia coli | |
| 17 | Q (O) | 50S ribosomal protein L17 | polymer | 125 | 14193.5 | 1 | UniProt (P0AG44) Pfam (PF01196) | Escherichia coli | |
| 18 | R (P) | 50S ribosomal protein L18 | polymer | 117 | 12794.7 | 1 | UniProt (P0C018) Pfam (PF00861) | Escherichia coli | |
| 19 | S (Q) | 50S ribosomal protein L19 | polymer | 114 | 13028.1 | 1 | UniProt (P0A7K6) Pfam (PF01245) | Escherichia coli | |
| 20 | T (R) | 50S ribosomal protein L20 | polymer | 117 | 13396.8 | 1 | UniProt (P0A7L3) Pfam (PF00453) | Escherichia coli | |
| 21 | U (S) | 50S ribosomal protein L21 | polymer | 103 | 11586.4 | 1 | UniProt (P0AG48) Pfam (PF00829) | Escherichia coli | |
| 22 | V (T) | 50S ribosomal protein L22 | polymer | 110 | 12253.4 | 1 | UniProt (P61175) Pfam (PF00237) | Escherichia coli | |
| 23 | W (U) | 50S ribosomal protein L23 | polymer | 95 | 10776.7 | 1 | UniProt (P0ADZ0) Pfam (PF00276) | Escherichia coli | |
| 24 | X (V) | 50S ribosomal protein L24 | polymer | 102 | 11078.9 | 1 | UniProt (P60624) Pfam (PF00467) Pfam (PF17136) | Escherichia coli | |
| 25 | Y (W) | 50S ribosomal protein L25 | polymer | 94 | 10713.5 | 1 | UniProt (P68919) Pfam (PF01386) | Escherichia coli | |
| 26 | Z (X) | 50S ribosomal protein L27 | polymer | 76 | 8275.5 | 1 | UniProt (P0A7L8) Pfam (PF01016) | Escherichia coli | |
| 27 | AA (Y) | 50S ribosomal protein L28 | polymer | 77 | 8896.4 | 1 | UniProt (P0A7M2) Pfam (PF00830) | Escherichia coli | |
| 28 | BA (Z) | 50S ribosomal protein L29 | polymer | 62 | 7155.3 | 1 | UniProt (P0A7M6) Pfam (PF00831) | Escherichia coli | |
| 29 | CA (a) | 50S ribosomal protein L30 | polymer | 58 | 6423.6 | 1 | UniProt (P0AG51) Pfam (PF00327) | Escherichia coli | |
| 30 | DA (b) | 50S ribosomal protein L32 | polymer | 56 | 6332.2 | 1 | UniProt (P0A7N4) Pfam (PF01783) | Escherichia coli | |
| 31 | EA (c) | 50S ribosomal protein L33 | polymer | 51 | 5928.0 | 1 | UniProt (P0A7N9) Pfam (PF00471) | Escherichia coli | |
| 32 | FA (d) | 50S ribosomal protein L34 | polymer | 46 | 5397.5 | 1 | UniProt (P0A7P5) Pfam (PF00468) | Escherichia coli | |
| 33 | GA (e) | 50S ribosomal protein L35 | polymer | 64 | 7181.8 | 1 | UniProt (P0A7Q1) Pfam (PF01632) | Escherichia coli | Ribosomal protein A |
| 34 | HA (f) | 50S ribosomal protein L36 | polymer | 38 | 4377.4 | 1 | UniProt (P0A7Q6) Pfam (PF00444) | Escherichia coli | Ribosomal protein B |
| 35 | IA (g) | Protein translocase subunit SecY | polymer | 416 | 45628.0 | 1 | UniProt (P0AGA2) Pfam (PF00344) | Escherichia coli | |
| 36 | JA (h) | Protein translocase subunit SecE | polymer | 56 | 6241.4 | 1 | UniProt (P0AG96) Pfam (PF00584) | Escherichia coli | |
| 37 | KA (i) | Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein,Signal recognition particle protein | polymer | 450 | 48514.7 | 1 | UniProt (P0AGD7) Pfam (PF02881) Pfam (PF00448) Pfam (PF02978) | Escherichia coli | Fifty-four homolog,Ffh,p48,Fifty-four homolog,Ffh,p48,Fifty-four homolog,Ffh,p48,Fifty-four homolog,Ffh,p48,Fifty-four homolog,Ffh,p48,Fifty-four homolog,Ffh,p48,Fifty-four homolog,Ffh,p48,Fifty-four homolog,Ffh,p48,Fifty-four homolog,Ffh,p48,Fifty-four homolog,Ffh,p48 |
| 38 | LA (j) | Protein-export membrane protein SecG | polymer | 71 | 7234.6 | 1 | UniProt (P0AG99) Pfam (PF03840) | Escherichia coli | P12,Preprotein translocase band 1 subunit |
| 39 | MA (k) | Signal sequence (1A9L) | polymer | 23 | 2276.8 | 1 | Escherichia coli | ||
| 40 | NA (l) | Signal recognition particle receptor FtsY | polymer | 271 | 29443.7 | 1 | UniProt (P10121) Pfam (PF02881) Pfam (PF00448) | Escherichia coli | SRP receptor |
| 41 | OA (f) | ZINC ION | non-polymer | 65.4 | 1 | Chemie (ZN) | |||
| 42 | PA, SA (i, l) | TETRAFLUOROALUMINATE ION | non-polymer | 103.0 | 2 | Chemie (ALF) | |||
| 43 | QA, TA (i, l) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 44 | RA, UA (i, l) | GUANOSINE-5'-DIPHOSPHATE | non-polymer | 443.2 | 2 | Chemie (GDP) |
Sequence modifications
i: 4 - 346 (UniProt: P0AGD7)
i: 347 - 368 (PDB: 5NCO)
i: 369 - 434 (UniProt: P0AGD7)
i: 435 - 453 (PDB: 5NCO)
i: 347 - 368 (PDB: 5NCO)
i: 369 - 434 (UniProt: P0AGD7)
i: 435 - 453 (PDB: 5NCO)
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 40 |
| Total formula weight | 1539912.1 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 1206.4 | |
| All* | Total formula weight | 1541118.4 |
