5N9J
Core Mediator of transcriptional regulation
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A | Mediator of RNA polymerase II transcription subunit 14 | polymer | 591 | 68020.3 | 1 | UniProt (Q9P7Y4) Pfam (PF08638) In PDB | Schizosaccharomyces pombe (Fission yeast) | Mediator complex subunit 14,Mediator of RNA polymerase II complex subunit pmc1 |
| 2 | B | Mediator of RNA polymerase II transcription subunit 10 | polymer | 144 | 16352.2 | 1 | UniProt (P87310) Pfam (PF09748) In PDB | Schizosaccharomyces pombe (Fission yeast) | Mediator complex subunit 10 |
| 3 | C | Mediator of RNA polymerase II transcription subunit 19 | polymer | 138 | 15952.1 | 1 | UniProt (Q9Y7N2) Pfam (PF08633) In PDB | Schizosaccharomyces pombe (Fission yeast) | Mediator complex subunit 19,RNA polymerase II mediator complex protein rox3 |
| 4 | D | Mediator of RNA polymerase II transcription subunit 21 | polymer | 138 | 15821.0 | 1 | UniProt (O94376) Pfam (PF11221) In PDB | Schizosaccharomyces pombe (Fission yeast) | Mediator complex subunit 21,Suppressor of RNA polymerase B 7 |
| 5 | E | Mediator of RNA polymerase II transcription subunit 7 | polymer | 376 | 43573.1 | 1 | UniProt (O60104) Pfam (PF05983) In PDB | Schizosaccharomyces pombe (Fission yeast) | Mediator complex subunit 7 |
| 6 | F | Mediator Complex Subunit 9 | polymer | 121 | 13811.0 | 1 | UniProt (O13964) In PDB | Schizosaccharomyces pombe (Fission yeast) | |
| 7 | G | Mediator of RNA polymerase II transcription subunit 4 | polymer | 239 | 27370.4 | 1 | UniProt (Q9Y821) Pfam (PF10018) In PDB | Schizosaccharomyces pombe (Fission yeast) | Mediator complex subunit 4,RNA polymerase II mediator complex protein pmc4 |
| 8 | R | Mediator of RNA polymerase II transcription subunit 31 | polymer | 139 | 16914.0 | 1 | UniProt (Q9USH1) Pfam (PF05669) In PDB | Schizosaccharomyces pombe (Fission yeast) | Cell separation protein sep10,Mediator complex subunit 31,Soh1 homolog |
| 9 | S | Mediator of RNA polymerase II transcription subunit 6 | polymer | 216 | 24928.9 | 1 | UniProt (Q9US45) Pfam (PF04934) In PDB | Schizosaccharomyces pombe (Fission yeast) | Mediator complex subunit 6,RNA polymerase II mediator complex protein pmc5 |
| 10 | U | Mediator of RNA polymerase II transcription subunit 8 | polymer | 200 | 23360.1 | 1 | UniProt (O94646) Pfam (PF10232) In PDB | Schizosaccharomyces pombe (Fission yeast) | Cell separation protein sep15,Mediator complex subunit 8 |
| 11 | V | Mediator of RNA polymerase II transcription subunit 11 | polymer | 112 | 12644.2 | 1 | UniProt (Q9P6Q0) Pfam (PF10280) In PDB | Schizosaccharomyces pombe (Fission yeast) | Mediator complex subunit 11 |
| 12 | W | Mediator of RNA polymerase II transcription subunit 17 | polymer | 545 | 62551.4 | 1 | UniProt (P87306) Pfam (PF10156) In PDB | Schizosaccharomyces pombe (Fission yeast) | Mediator complex subunit 17,Suppressor of RNA polymerase B 4 homolog |
| 13 | X | Mediator of RNA polymerase II transcription subunit 18 | polymer | 210 | 24345.7 | 1 | UniProt (O14198) Pfam (PF09637) In PDB | Schizosaccharomyces pombe (Fission yeast) | Cell separation protein sep11,Mediator complex subunit 18,RNA polymerase II mediator complex protein pmc6 |
| 14 | Y | Mediator of RNA polymerase II transcription subunit 20 | polymer | 193 | 22374.8 | 1 | UniProt (Q10317) Pfam (PF08612) In PDB | Schizosaccharomyces pombe (Fission yeast) | Mediator complex subunit 20 |
| 15 | Z | Mediator of RNA polymerase II transcription subunit 22 | polymer | 136 | 15396.2 | 1 | UniProt (O14010) Pfam (PF06179) In PDB | Schizosaccharomyces pombe (Fission yeast) | Mediator complex subunit 22,Suppressor of RNA polymerase B 6 homolog |
Sequence modifications
A: 2 - 580 (UniProt: Q9P7Y4)
X: 1 - 207 (UniProt: O14198)
| PDB | External Database | Details |
|---|---|---|
| Met -10 | - | initiating methionine |
| Gly -9 | - | expression tag |
| His -8 | - | expression tag |
| His -7 | - | expression tag |
| His -6 | - | expression tag |
| His -5 | - | expression tag |
| His -4 | - | expression tag |
| His -3 | - | expression tag |
| His -2 | - | expression tag |
| His -1 | - | expression tag |
| His 0 | - | expression tag |
| His 1 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Met -2 | - | initiating methionine |
| Ala -1 | - | expression tag |
| Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 15 |
| Total formula weight | 403415.4 | |
| All* | Total formula weight | 403415.4 |
