5MZA
The DBLb domain of PF11_0521 PfEMP1 bound to human ICAM-1
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | Erythrocyte membrane protein 1 (PfEMP1) | polymer | 488 | 55517.4 | 1 | UniProt (Q8IHM0) Pfam (PF05424) | Plasmodium falciparum 3D7 | Erythrocyte membrane protein 1,PfEMP1 |
| 2 | B (B) | Intercellular adhesion molecule 1 | polymer | 186 | 20495.3 | 1 | UniProt (P05362) Pfam (PF03921) | Homo sapiens (Human) | ICAM-1,Major group rhinovirus receptor |
| 3 | C (C) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
| 4 | D (A) | TRIPHOSPHATE | non-polymer | 258.0 | 1 | Chemie (3PO) | |||
| 5 | E, F (B) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
| 6 | G (B) | INOSITOL HEXAKISPHOSPHATE | non-polymer | 660.0 | 1 | Chemie (IHP) | |||
| 7 | H, I (A, B) | water | water | 18.0 | 11 | Chemie (HOH) |
Sequence modifications
A: 728 - 1214 (UniProt: Q8IHM0)
B: 1 - 185 (UniProt: P05362)
| PDB | External Database | Details |
|---|---|---|
| Ser 727 | - | expression tag |
| PDB | External Database | Details |
|---|---|---|
| Gly 186 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 76012.7 | |
| Branched | Number of molecules | 1 |
| Total formula weight | 424.4 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 1360.4 | |
| All* | Total formula weight | 77797.6 |
