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5M5N

Pseudo-atomic model of microtubule-bound S.pombe kinesin-5 motor domain in the AMPPNP state (based on cryo-electron microscopy experiment): the N-terminus adopts multiple conformations.

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1ATubulin alpha-1D chainpolymer45250236.41UniProt (Q2HJ86)
Pfam (PF00091)
Pfam (PF03953)
In PDB
Bos taurus (Bovine)
2BTubulin beta-2B chainpolymer44549907.81UniProt (Q6B856)
Pfam (PF00091)
Pfam (PF03953)
In PDB
Bos taurus (Bovine)
3CKinesin-like protein cut7polymer36940737.51UniProt (P24339)
Pfam (PF00225)
In PDB
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)Cell untimely torn protein 7
4A, CMAGNESIUM IONnon-polymer24.32Chemie (MG)
5AGUANOSINE-5'-TRIPHOSPHATEnon-polymer523.21Chemie (GTP)
6BGUANOSINE-5'-DIPHOSPHATEnon-polymer443.21Chemie (GDP)
7BTAXOLnon-polymer853.91Chemie (TA1)
8CPHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTERnon-polymer506.21Chemie (ANP)
Sequence modifications
A: 1 - 452 (UniProt: Q2HJ86)
PDBExternal DatabaseDetails
Ile 7Val 7conflict
Ile 114Leu 114conflict
Ser 136Leu 136conflict
Val 137Ile 137conflict
Gly 265Ile 265conflict
Glu 358Gln 358conflict
Val 437Met 437conflict
Glu 450Asp 450conflict
B: 1 - 445 (UniProt: Q6B856)
PDBExternal DatabaseDetails
Ala 55Thr 55conflict
Val 170Met 170conflict
Ala 296Ser 296conflict
Val 316Ile 316conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains3
Total formula weight140881.6
Non-Polymers*Number of molecules6
Total formula weight2375.1
All*Total formula weight143256.7
*Water molecules are not included.

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PDB entries from 2024-07-17

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