5M2Q
Structure of cobinamide-bound BtuF mutant W66F, the periplasmic vitamin B12 binding protein in E.coli
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Outer membrane protein A,Vitamin B12-binding protein | polymer | 289 | 31472.9 | 2 | UniProt (P0A910) UniProt (P37028) Pfam (PF01497) | Escherichia coli | Outer membrane protein II* |
| 2 | C, G (A, B) | COB(II)INAMIDE | non-polymer | 990.1 | 2 | Chemie (CBY) | |||
| 3 | D, H (A, B) | CYANIDE ION | non-polymer | 26.0 | 2 | Chemie (CYN) | |||
| 4 | E, F, I (A, B) | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
| 5 | J, K (A, B) | water | water | 18.0 | 390 | Chemie (HOH) |
Sequence modifications
A, B: -2 - 19 (UniProt: P0A910)
A, B: 22 - 266 (UniProt: P37028)
| PDB | External Database | Details |
|---|---|---|
| Ser 20 | - | linker |
| Met 21 | - | linker |
| PDB | External Database | Details |
|---|---|---|
| Phe 66 | Trp 66 | engineered mutation |
| Ser 267 | - | expression tag |
| Gly 268 | - | expression tag |
| Ser 269 | - | expression tag |
| Leu 270 | - | expression tag |
| Glu 271 | - | expression tag |
| Val 272 | - | expression tag |
| Leu 273 | - | expression tag |
| Phe 274 | - | expression tag |
| Gln 275 | - | expression tag |
| Gly 276 | - | expression tag |
| Pro 277 | - | expression tag |
| Gly 278 | - | expression tag |
| Gly 279 | - | expression tag |
| Ser 280 | - | expression tag |
| His 281 | - | expression tag |
| His 282 | - | expression tag |
| His 283 | - | expression tag |
| His 284 | - | expression tag |
| His 285 | - | expression tag |
| His 286 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 62945.8 | |
| Non-Polymers* | Number of molecules | 7 |
| Total formula weight | 2308.5 | |
| All* | Total formula weight | 65254.3 |






