5LDB
Crystal Structure of Polyphosphate Kinase from Meiothermus ruber bound to ADP
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D | Polyphosphate:AMP phosphotransferase | polymer | 287 | 33778.3 | 4 | UniProt (A0A0S7ASE9) In PDB | Meiothermus ruber H328 | |
2 | A, B, C, D | ADENOSINE-5'-DIPHOSPHATE | non-polymer | 427.2 | 4 | Chemie (ADP) | |||
3 | A, B, C, D | PHOSPHATE ION | non-polymer | 95.0 | 4 | Chemie (PO4) | |||
4 | A, B, D | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) | |||
5 | A | GLYCEROL | non-polymer | 92.1 | 1 | Chemie (GOL) | |||
6 | B | CHLORIDE ION | non-polymer | 35.5 | 1 | Chemie (CL) | |||
7 | water | water | 18.0 | 486 | Chemie (HOH) |
Sequence modifications
A, B, C, D: 1 - 267 (UniProt: A0A0S7ASE9)
PDB | External Database | Details |
---|---|---|
Met -19 | - | initiating methionine |
Gly -18 | - | expression tag |
Ser -17 | - | expression tag |
Ser -16 | - | expression tag |
His -15 | - | expression tag |
His -14 | - | expression tag |
His -13 | - | expression tag |
His -12 | - | expression tag |
His -11 | - | expression tag |
His -10 | - | expression tag |
Ser -9 | - | expression tag |
Ser -8 | - | expression tag |
Gly -7 | - | expression tag |
Leu -6 | - | expression tag |
Val -5 | - | expression tag |
Pro -4 | - | expression tag |
Arg -3 | - | expression tag |
Gly -2 | - | expression tag |
Ser -1 | - | expression tag |
His 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 135113.4 | |
Non-Polymers* | Number of molecules | 14 |
Total formula weight | 2313.5 | |
All* | Total formula weight | 137426.8 |