5KRB
GCNF DNA Binding Domain - Oct4 DR0 Complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (A) | DNA (5'-D(*AP*GP*AP*GP*GP*TP*CP*AP*AP*GP*GP*CP*TP*AP*GP*A)-3') | polymer | 16 | 4996.3 | 1 | Mus musculus | ||
| 2 | B, D (B, G) | Nuclear receptor subfamily 6 group A member 1 | polymer | 84 | 9747.6 | 2 | UniProt (Q64249) Pfam (PF00105) | Mus musculus (Mouse) | Germ cell nuclear factor,mGCNF,Retinoid receptor-related testis-specific receptor,RTR |
| 3 | C (E) | DNA (5'-D(*TP*CP*TP*AP*GP*CP*CP*TP*TP*GP*AP*CP*CP*TP*CP*T)-3') | polymer | 16 | 4800.1 | 1 | Mus musculus | ||
| 4 | E, F, G, H (B, G) | ZINC ION | non-polymer | 65.4 | 4 | Chemie (ZN) | |||
| 5 | I, J, K, L (A, B, E, G) | water | water | 18.0 | 43 | Chemie (HOH) |
Sequence modifications
B, G: 72 - 155 (UniProt: Q64249)
| PDB | External Database | Details |
|---|---|---|
| Ser 104 | Cys 104 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 29291.5 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 261.6 | |
| All* | Total formula weight | 29553.2 |
