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5KRB

GCNF DNA Binding Domain - Oct4 DR0 Complex

Functional Information from GO Data
ChainGOidnamespacecontents
B0003700molecular_functionDNA-binding transcription factor activity
B0006355biological_processregulation of DNA-templated transcription
B0008270molecular_functionzinc ion binding
B0043565molecular_functionsequence-specific DNA binding
G0003700molecular_functionDNA-binding transcription factor activity
G0006355biological_processregulation of DNA-templated transcription
G0008270molecular_functionzinc ion binding
G0043565molecular_functionsequence-specific DNA binding
Functional Information from PDB Data
site_idAC1
Number of Residues4
Detailsbinding site for residue ZN B 201
ChainResidue
BCYS75
BCYS78
BCYS92
BCYS95

site_idAC2
Number of Residues4
Detailsbinding site for residue ZN B 202
ChainResidue
BCYS111
BCYS117
BCYS127
BCYS130

site_idAC3
Number of Residues4
Detailsbinding site for residue ZN G 201
ChainResidue
GCYS78
GCYS92
GCYS95
GCYS75

site_idAC4
Number of Residues4
Detailsbinding site for residue ZN G 202
ChainResidue
GCYS111
GCYS117
GCYS127
GCYS130

Functional Information from PROSITE/UniProt
site_idPS00031
Number of Residues27
DetailsNUCLEAR_REC_DBD_1 Nuclear hormones receptors DNA-binding region signature. CliCg.Dratgl.HYgiisCegCkgFFkR
ChainResidueDetails
BCYS75-ARG101

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues150
DetailsDNA_BIND: Nuclear receptor => ECO:0000255|PROSITE-ProRule:PRU00407
ChainResidueDetails
BGLN72-GLU147
GGLN72-GLU147

site_idSWS_FT_FI2
Number of Residues88
DetailsZN_FING: NR C4-type => ECO:0000255|PROSITE-ProRule:PRU00407
ChainResidueDetails
BCYS75-CYS95
BCYS111-CYS135
GCYS75-CYS95
GCYS111-CYS135

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PDB entries from 2024-07-24

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